Gene Sputcn32_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1621 
Symbol 
ID5079443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1845992 
End bp1846507 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content46% 
IMG OID640498760 
Producthypothetical protein 
Protein accessionYP_001183145 
Protein GI146292721 
COG category[S] Function unknown 
COG ID[COG4929] Uncharacterized membrane-anchored protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATG TGATGGGAAA ACTGTCGGCT TCACATAAAT GGGCGCTGGG CATCGTACTT 
TTCACGACAA TGGTAATTCT TGCTGGTGTA AATTGGCGCA TTTTCAAGTT TGAACAGATC
CTTAATCACG GGCAAGTGGT GCGTTTTGCA TTAGCGCCGG TCGATCCGCG TTCATTAATG
CAGGGGGATT ATATGGCGCT TGAATATGCC ATCGCGCGTG ATGTGCGTAG TGCTTTGGCA
CCGCAACAAA CCCAAGGCCA GTTACTATTG GCATTAGATG AGCAAAAGGT TGCGCGGTTT
GTGGATTTTT ATACTGATCA AGCATTAGGC AAAGATCAGC TTAGGGTGCA ATTTCGTGTC
CGTGGGAATC AAATTAAGCT CGCATCGAAC AGCTTTTTCT TTGAAGAAGG CCAAGCCGAT
CATTTTAGTG CAGCTAAATA CGGTGAGTTT CGGGTGAACT TGCAGGGTCA GTTACTGCTG
GTTAGTTTGC TCGATGAGAA GTTGCAGCCC TTATAG
 
Protein sequence
MGNVMGKLSA SHKWALGIVL FTTMVILAGV NWRIFKFEQI LNHGQVVRFA LAPVDPRSLM 
QGDYMALEYA IARDVRSALA PQQTQGQLLL ALDEQKVARF VDFYTDQALG KDQLRVQFRV
RGNQIKLASN SFFFEEGQAD HFSAAKYGEF RVNLQGQLLL VSLLDEKLQP L