Gene Sputcn32_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1613 
Symbol 
ID5079435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1839732 
End bp1840355 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content39% 
IMG OID640498752 
Productprolyl 4-hydroxylase, alpha subunit 
Protein accessionYP_001183137 
Protein GI146292713 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCGC AATTGAGTGA AGCAGTGCTG GATGTGATCG CTGACGCCTT GGTAAATAAA 
GGCTATATAC TTTTAACGGA CTTAGTTCCT CATAATATTA GCCAAGTTTT ATTAGATAAA 
ATTCAAGCTA CAGATTTATA TGAGTTGAAA GCGGCCTCAA TAGGCCGCGG TGTGGAACAA 
CAATTAAACC CAGATATTCG CCGCGATAGG ATCCAGTGGC TAGATGAGCA GAATAAGCCA 
GATATCTTGT ATCTTGACTT GATGACACAG TTAAAAAACG GTTTAAATCG TCGCTTATTT 
ATGGGGTTAT TTGATTATGA AAGTCATTAT GCGGTATATC AGCCAGGGGC ATTCTATAAA 
AAGCATGTTG ATGCCTTAAA AGGTAGCCAA AATCGTATCT TAACCACAGT GTTTTTTTTG 
AATCCTAACT GGAAAGAAGC CGATTGTGGT GAATTGATTA TTTATGATGA AGAGGATAAT 
GAATTAGAAC GAATCCCCCC AAAAATGGGG CATTTTGTGA TTTTTCTCAG TGAACGCTTT 
CCCCATGAGG TCACTCAAAC TCGAGCACAG CGTAATAGTA TTGCTGGCTG GTTTAGGGTG 
AGTAATAGCA TCCATGGCTT TTGA
 
Protein sequence
MVSQLSEAVL DVIADALVNK GYILLTDLVP HNISQVLLDK IQATDLYELK AASIGRGVEQ 
QLNPDIRRDR IQWLDEQNKP DILYLDLMTQ LKNGLNRRLF MGLFDYESHY AVYQPGAFYK 
KHVDALKGSQ NRILTTVFFL NPNWKEADCG ELIIYDEEDN ELERIPPKMG HFVIFLSERF 
PHEVTQTRAQ RNSIAGWFRV SNSIHGF