| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1609 |
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| Symbol | |
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| ID | 5079425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1831973 |
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| End bp | 1832722 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498742 |
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| Product | tetratricopeptide domain-containing protein |
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| Protein accession | YP_001183133 |
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| Protein GI | 146292709 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000616267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTG CCGTCTTAAT TACGGCAATG TTCCTTGGCG CAGGTGCTGC GGTAGCAGCA
CCTGCTCCTG TGGAAGATAT TGCTGGTGGT TCAGGTGATG ACAGACTCGC TCGTTTAGAG
CGCATCGTTA AATCAAGACA ACAAAGCGAG CTAGAAATGC AGCGTCGTCT GGATACGTTG
CAGCAGGAAG TTCTCGAATT ACGTGGTTTA ACCGAACAAC AGAATTATCA AATAGAACAG
ATGCAACAGC GTCAACGTCA ACTTTATGAT GATGTAGCGA ATTTATCCTC AAAAGCTTCT
GCCGCTCCAG CCGCTTCTGC AGCAACATCG ACACCTTCTG TTGCTACAGC CAATGCCGCC
GCAAGTAGCT TAAGTGAAAC CGCAAGTTAT GAAAGCGCCG TTAACTTAGT TTTGAAAGAA
CGTAAGTATG ACGATGCTAT TCCTGCATTT AGAGCTTTTA TTAAACAGTA TCCAGATTCA
GTGTATGCAG CCAATGCTAA CTACTGGCTG GGCCAATTAT TATTTAATAA AAGTGAGTTT
GCTGAAGCTA AGCAAGCCTT CAATACTGTC GTTGTGCGTT TTAGCGATTC AAATAAACGT
GGTGATAGTT TAGTCAAACT TGGCATGATC GCAGAGAAAA CAGGCGATAA AGCGGGTGCC
ACTCAGTATT ACCAACAAGT CGTGAAAGAC TACGCAAACA GCGCCGCTGC ACGTATTGCC
CAGCAGCAAT TGGCTGCAAT TAAAGTGTAA
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| Protein sequence | MKRAVLITAM FLGAGAAVAA PAPVEDIAGG SGDDRLARLE RIVKSRQQSE LEMQRRLDTL
QQEVLELRGL TEQQNYQIEQ MQQRQRQLYD DVANLSSKAS AAPAASAATS TPSVATANAA
ASSLSETASY ESAVNLVLKE RKYDDAIPAF RAFIKQYPDS VYAANANYWL GQLLFNKSEF
AEAKQAFNTV VVRFSDSNKR GDSLVKLGMI AEKTGDKAGA TQYYQQVVKD YANSAAARIA
QQQLAAIKV
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