| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1607 |
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| Symbol | tolB |
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| ID | 5079423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1830037 |
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| End bp | 1831365 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498740 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001183131 |
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| Protein GI | 146292707 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000108344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTT TGGCCAAATG GTTAGCATTG GCAGTACTGC TATGCACCAC CCCCACAAAA
GCGGCATTGG ATATTGTGAT CACTGAAGGT ATTGATGCTG CTCGTCCTAT CGCGGTCATG
CCTTTTGTAT GGCAAGGTAC TGGCGCACCA CCTCAAGCCA TCGCTGATGT TGTTATGTCA
GATCTTGTGC GTAGTGGCAC TTTTAAACCA TTAGACGAGT TAGGGTTACC TCAGCGTAAT
ATTGGCGCTG TGGCGCAATT TCAAGCGAGT GCTTGGGGGA GTGTGGGCGC AGAGGCTTTG
GTTTTAGGCT CAGTTAAGCC CTATGGCACT GATCAATATC TTGTTAGTTT TGATCTAATT
GATCTTGTTA AAGCGCAAAA CCAAAGTTTA AAAGGGGCTG TCAGTCCAAC TGAGTTTTTA
ATGGACAGTC GCCAAACCGT CATTTCAGCG GCACAATTTC GCCAATATGG GCATAGGATC
AGCGATATTG TATATGAGAA ATTGACGGGT ATCCGCGGAG CATTTTTAAC GCGTATCTCT
TACGTAGTTG TAAACCATAC GCAAAAAGCA CCCTATCAGT TGATGATTGC TGATTATGAC
GGCTTTAACG AGCAAATGTT ATTACGTTCA CCAGAACCTT TGATGTCACC GACATGGTCT
CCTGATGGAC GTCGTTTGGC GTATGTGAGT TTTGAAAACA AGAAAGCCGA AATTTTTGTA
CAAGATCTGT ATACCCAAGT ACGTACTAAG GTGAGCAGCT TTCCTGGTAT TAATGGTGCT
CCAGCATTTT CACCCGATGG AAAATCCTTA GCTGTAACTT TATCTAAGGA TGGTCAACCT
GAAATATACG TGATTGATAT TGCAACAAAG GCCATTAAAC GCATTACAAA CCATTATGCA
ATTGATACAG AACCCTCTTG GTATCCTGAT GGAAAATCTC TGTTGTTTAC CTCTGAGCGT
GGTGGTAAAC CCCAGTTATA TCGCGTAGAT TTAGCTTCTG GCAAGGTGAC TCGTGAAACC
TTTGAAGGTG AATGGAACCT CGGTGGATCT ATTACTCCCG ATGGGCGTAG TATGATCTTT
GTTAATCGAA CAAATGGTAA ATTTAACATT GCGCGTATGG ATCTCAATAC GCGTTTTATG
CAGGTGCTGA CTTCGACACG TTTGGATGAG TCTCCAAGCG TGGCACCTAA TGGTACTATG
GTGATTTATG GTACTACGCA CCAAGGCAAA CAAGTTTTAG CTGCCGTTTC AACGGACGGA
CGCTTTAAAG CAAGGTTACC GGTAGGTCAG GGTGAGGTGA AATCACCTTC TTGGTCTCCG
TTTCTCTAA
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| Protein sequence | MKILAKWLAL AVLLCTTPTK AALDIVITEG IDAARPIAVM PFVWQGTGAP PQAIADVVMS
DLVRSGTFKP LDELGLPQRN IGAVAQFQAS AWGSVGAEAL VLGSVKPYGT DQYLVSFDLI
DLVKAQNQSL KGAVSPTEFL MDSRQTVISA AQFRQYGHRI SDIVYEKLTG IRGAFLTRIS
YVVVNHTQKA PYQLMIADYD GFNEQMLLRS PEPLMSPTWS PDGRRLAYVS FENKKAEIFV
QDLYTQVRTK VSSFPGINGA PAFSPDGKSL AVTLSKDGQP EIYVIDIATK AIKRITNHYA
IDTEPSWYPD GKSLLFTSER GGKPQLYRVD LASGKVTRET FEGEWNLGGS ITPDGRSMIF
VNRTNGKFNI ARMDLNTRFM QVLTSTRLDE SPSVAPNGTM VIYGTTHQGK QVLAAVSTDG
RFKARLPVGQ GEVKSPSWSP FL
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