Gene Sputcn32_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1600 
Symbol 
ID5079416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1822925 
End bp1823599 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content45% 
IMG OID640498733 
Productribonuclease T 
Protein accessionYP_001183124 
Protein GI146292700 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000738709 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA TTTGCGACGC GAACAAATTG AAACACCGAT TTCGAGGCTA CTTTCCGGTA 
GTCATTGATG TCGAAACGGC GGGCTTCAAC TCTCAAACGG ATGCGTTGCT GGAAATAGCC
GTCACCCTGC TGAAAATGGA TGATGAGGGC ATGCTAGGCA TTGATAAAAC CTTGCACTTC
CATATAGAAC CATTTGAAGG CGCCAATTTA GAACCTGCAG CACTCGCTTT TAATGGGATA
GATCCTAACA ATCCATTACG TGGCGCTGTC AGCGAAAAAG AGGCATTTTT AGACATTTTT
AAAGCTGTCA AAAAGGCACA AAAAGCTGCT GATTGTCATC GCTGTATTAT TGTGGCCCAT
AATGCCGCTT TTGATCATGG TTTTGTCAGT AAAGCGATTG AGCGTTGTGA CTTAAAACGC
TCACCATTTC ATCCTTTTGC CACCTTCGAT ACCGCTACAC TCGCAGGACT TGCTATTGGT
CATACCGTTT TAGCGAAAGC ATGTATGATG GCAGGTATTC CCTTTGACAA TAAAGAAGCC
CACTCAGCGT TATATGATAC TGAACGCACA GCGGAGCTCT TTTGCTACAT AGTCAATCGC
TGGAAACAAT TAGGCGGTTG GCCTTTACTG GCAGCAGCAG GTGCGCAAGA TGCTGAAAGT
GACACTGAAG AATAA
 
Protein sequence
MSDICDANKL KHRFRGYFPV VIDVETAGFN SQTDALLEIA VTLLKMDDEG MLGIDKTLHF 
HIEPFEGANL EPAALAFNGI DPNNPLRGAV SEKEAFLDIF KAVKKAQKAA DCHRCIIVAH
NAAFDHGFVS KAIERCDLKR SPFHPFATFD TATLAGLAIG HTVLAKACMM AGIPFDNKEA
HSALYDTERT AELFCYIVNR WKQLGGWPLL AAAGAQDAES DTEE