Gene Sputcn32_1597 details

Gene Information

• Locus tag: Sputcn32_1597
• Symbol: upp
• ID: 5079413
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 1819779
• End bp: 1820405
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640498730
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_001183121
• Protein GI: 146292697
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000000154969
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTTG TCGAGGTTAA ACATCCGTTA GTGCGTCACA AAATCGGCCT AATGCGCGAA 
GGTGACATTA GCACTAAGCG TTTCCGTGAA CTGGCTGCTG AAGTGGGCAG TTTATTAACC 
TATGAAGCTA CCGCAGATTT CGAAACCGAA ACTGTTACGA TTGAAGGCTG GAATGGTCCG 
GTTGAAGTCG ATCAAATCAA AGGTAAAAAA GTCACTGTTG TACCTATTTT ACGTGCGGGT 
TTGGGTATGA TGGACGGTGT ACTTGAACAC ATTCCAAGTG CGCGCATCTC TGTTGTGGGT 
ATTTACCGTG ATGAAGAGAC CCTTGAGCCT GTGCCTTATT TTGAGAAGCT GGCGAGTGAT 
ATGAACGAGC GTATCGCCTT AGTTGTTGAC CCAATGCTCG CGACCGGTGG TTCTATGATT 
GCGACCGTCG ATTTATTGAA AAAGCGCGGT TGTACTTCAA TTAAGGCCTT AGTGCTAGTG 
GCTGCGCCTG AAGGCATTAA AGCCTTAGAA GCAGCGCATC CTGATATCGA GTTATATACT 
GCGGCTATCG ATAGATGCTT AAACGAGAAA GGTTATATCC TGCCAGGTCT TGGCGATGCA 
GGTGATAAAA TTTTTGGTAC TAAGTAA 

 

Protein sequence

MKVVEVKHPL VRHKIGLMRE GDISTKRFRE LAAEVGSLLT YEATADFETE TVTIEGWNGP 
VEVDQIKGKK VTVVPILRAG LGMMDGVLEH IPSARISVVG IYRDEETLEP VPYFEKLASD 
MNERIALVVD PMLATGGSMI ATVDLLKKRG CTSIKALVLV AAPEGIKALE AAHPDIELYT 
AAIDRCLNEK GYILPGLGDA GDKIFGTK