| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1579 |
|---|
| Symbol | |
|---|
| ID | 5079539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1797685 |
|---|
| End bp | 1798713 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640498712 |
|---|
| Product | putative glycerol-3-phosphate acyltransferase PlsX |
|---|
| Protein accession | YP_001183103 |
|---|
| Protein GI | 146292679 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000278649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGTC TGACGCTTGC GTTAGATGCG ATGGGTGGTG ATCATGGCCC CCACGTCACA
GTGCCTGCAG CCTTGCGGGC ACTACAATTA CACTCTTTTC TTCAAATCAT TTTAGTCGGT
GATAAGACTG AAATTGATGT CTATTTACGT CAAGCAGATC CGCAGTTACT TTCTCGTATT
GAAGTCATTC ATACCGATGA AGTCGTGAGT ATGTCGGATA GGCCTGTACA CGCTTTACGT
ACGCGTAAAA ATAGTTCGAT GCGTTTGGCT ATTGAGTTGG TCCGCGATGC ACGTGCGTCA
GCCTGTGTGA GTGCTGGCAA TACCGGGGCT TTGATGGCTA TGGCAAAAGT ATTATTAAAA
ACGTTGCCCG GCATTGACCG TCCCGCATTA GTGAGCTGCT TACCCGCTGT GACTCAAAAA
CCGGTTTATT TGCTAGATCT TGGTGCAAAT GTTTCCTGCG ATTCTGAAAC CTTATTTCAA
TTTGCCGTTA TGGGTTCGGT TTTATGTGAA GCGGTTGATA AAAAATCGCG TCCAAAGGTT
GCGTTGCTTA ATGTCGGCGT TGAAGAAATT AAAGGTAACG ATCAAGTTCA GCAAGCCGCA
CAGTTACTGC AGCATACTGA ACAAATCAAT TACACTGGTT TTATCGAAGG CGATGAAATC
TATTCCGGTA ACGTAGATGT CATCGTTTGT GATGGTTTTG TGGGAAATAT CACGCTCAAA
ACTTCAGAAG GCATTGCCAA GTTATTGGTA CATCAGTTAA AACGGGGATT AACCCAAGGT
TTATTCGTGC GTTTCTTGGC TAAACTTATC GCTCCTCGCA TTCAGGCGGT TCTTAGTCAG
ATGAACCCCG ACCACTATAA CGGTGCAAGT CTGTTAGGAT TGCGCGGAAT AGTTGTAAAA
AGCCATGGAA ATGCGGATGA AACTGCCTAT TTACAAGCAA TTAGTTTGGC AGTAACAGAA
GCTCAACGTC GACTCCCTGA AATGATAAAA GATCGTTTAG AGTCGATTCT TTTAGATATA
AATAACTGA
|
|---|
| Protein sequence | MTSLTLALDA MGGDHGPHVT VPAALRALQL HSFLQIILVG DKTEIDVYLR QADPQLLSRI
EVIHTDEVVS MSDRPVHALR TRKNSSMRLA IELVRDARAS ACVSAGNTGA LMAMAKVLLK
TLPGIDRPAL VSCLPAVTQK PVYLLDLGAN VSCDSETLFQ FAVMGSVLCE AVDKKSRPKV
ALLNVGVEEI KGNDQVQQAA QLLQHTEQIN YTGFIEGDEI YSGNVDVIVC DGFVGNITLK
TSEGIAKLLV HQLKRGLTQG LFVRFLAKLI APRIQAVLSQ MNPDHYNGAS LLGLRGIVVK
SHGNADETAY LQAISLAVTE AQRRLPEMIK DRLESILLDI NN
|
|---|
| |