| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1574 |
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| Symbol | |
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| ID | 5079534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1794215 |
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| End bp | 1795207 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498707 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001183098 |
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| Protein GI | 146292674 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00553384 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACCG TTTTAGTCAG ATGGCGCATT ATGAATACAG TATCCACCCC ACAGCAACAG
GTTCAATTGA TCACGATTGA TGAAGATCAT TTCGAACAGC GAATCGACAA CTTTTTAATG
ACGGCTCTTA AGGGCGTACC TAAGAGCATG ATCTACCGCA TCGTCCGCAA GGGTGAGGTG
CGGGTCAATA AGAAACGTAT CAAACCTGAG TATAAGTTGC AGATGGGTGA CATAGTGCGT
ATCCCGCCCG TCAGAGTGGC GGAGTCGGAT AATCGTACCG CGCCTTCTGC CAACTTAAGC
AAAGTCTCGC AACTTGAAGA TCGTATTCTG CATGAAGATA ATCATTTAAT TGTGCTGAAT
AAACCTGCAG GTATTGCCGT GCATGGTGGT AGTGGTGTTG ATTACGGTGT GATTGAAGCG
CTGCGGTCGT TAAGACCACA GCAAAAGTTT TTAGAGCTAG TGCATCGTCT CGATAAAGAT
ACTTCGGGTG TGTTGTTGGT GGCTAAAAAG CGTAGCGCGC TTAAACATTT GCATGATCAA
CTTAGATATA AAAAGATGCA GAAAGACTAT TTGGCCTTAG TTAAAGGTGA ATGGTCTGCT
CAAGATAAAG TCGTTAAACA GCCTTTACTG AAGATTACGC TTAAGTCCGG TGAGCGCATA
GTGCGTGTTA ATGCGGAAGG TAAGCCTTCT GAAACGCGCT TTAAAATTAT GCAGCGGTAC
CAAGGTTGTA CTTTAGTGAA GGCGAGTCCT GTCACTGGAC GTACTCATCA AATTCGGGTG
CATTGCCAAT TTGCCGGACA TCCTATCGCC TGTGATGATA AATACAGTGA GCAAGGGTTT
GATGACAGCA TGCGTTCATT AGGTTTAACC CGACTCTTTT TACATGCCGC TGAATTGATG
TTCATTCATC CAGAAAATGA TGATGTGATG CGGATTTCAG CGCCTTTAGA TGAAAATTTG
TCGCAGTTAC TCGATAAGTT AAAACGTGCG TAA
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| Protein sequence | MATVLVRWRI MNTVSTPQQQ VQLITIDEDH FEQRIDNFLM TALKGVPKSM IYRIVRKGEV
RVNKKRIKPE YKLQMGDIVR IPPVRVAESD NRTAPSANLS KVSQLEDRIL HEDNHLIVLN
KPAGIAVHGG SGVDYGVIEA LRSLRPQQKF LELVHRLDKD TSGVLLVAKK RSALKHLHDQ
LRYKKMQKDY LALVKGEWSA QDKVVKQPLL KITLKSGERI VRVNAEGKPS ETRFKIMQRY
QGCTLVKASP VTGRTHQIRV HCQFAGHPIA CDDKYSEQGF DDSMRSLGLT RLFLHAAELM
FIHPENDDVM RISAPLDENL SQLLDKLKRA
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