Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1571 |
Symbol | rrmA |
ID | 5079531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1788167 |
End bp | 1788982 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640498704 |
Product | 23S rRNA methyltransferase A |
Protein accession | YP_001183095 |
Protein GI | 146292671 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTATT TATGTCCACT TTGTTCCGGA TTACTTGCCC GTGCCGGAGC TAGTTGGGTG TGCCCACAGC AACATAAGTT CGATATAGCC AAAGAAGGCT ATGTTAACTT GCTGCCTGTA CAAAAGAAAA ACTCAAAAGA TCCTGGCGAT AACAAACAGA TGATGTTTGC TAGGCGGGAG TTTTTAAACG CAGGATACTA CCAAATGTTG AGCGATAGAG TGAATGCATT GGCATTGGAA TATGCTGCAG GAGCAAAACA TATTTTGGAT ATAGGCTGTG GAGAAGGTTA TTACAGTCAT AGATTATTTC ACGTATTTGA GCAGGACCAC CCGTGTGTTT TACAGGGATT GGATATTTCT AAATCGGCAA TCAAATATGC TGCAAAACGG TATCCTAACT TACAATTTTG TGTGGCAAGT GCTTATGAGA TGCCGATTGC TTCACAAACG GTGGATTTAG CCATACGTAT TTATGCGCCT TCTAAAGTAG AAGAACTTCA GCGGATCATG GCTAAAAATG GTGTATTAAT CACTGTTTCA CCGGGGCCAA TGCACCATTT TGCCCTTAAA CAGCAAATTT ACGCTGAACC AAGGTTACAT CCAGAGTCTA ATGCGAGTCT TGAAGGATTT GAATGTATTC ATCAGCAACG ACTGATGTCA CAACTGGGAT TAAAAAATGC CGAGCATATT TCACATTTTC TAGAGATGAC GCCCTATGCA TGGAAGTTTA CTACAGAGCA GAAGCAATCT TTGGTAACAC AAGGGCTAAG TTGTGAGTTA GATTTTCAAA TTGAGGTTTA TCGTATTGCA AGATAG
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Protein sequence | MRYLCPLCSG LLARAGASWV CPQQHKFDIA KEGYVNLLPV QKKNSKDPGD NKQMMFARRE FLNAGYYQML SDRVNALALE YAAGAKHILD IGCGEGYYSH RLFHVFEQDH PCVLQGLDIS KSAIKYAAKR YPNLQFCVAS AYEMPIASQT VDLAIRIYAP SKVEELQRIM AKNGVLITVS PGPMHHFALK QQIYAEPRLH PESNASLEGF ECIHQQRLMS QLGLKNAEHI SHFLEMTPYA WKFTTEQKQS LVTQGLSCEL DFQIEVYRIA R
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