| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1563 |
|---|
| Symbol | |
|---|
| ID | 5079523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 1779045 |
|---|
| End bp | 1782308 |
|---|
| Gene Length | 3264 bp |
|---|
| Protein Length | 1087 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640498696 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183087 |
|---|
| Protein GI | 146292663 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.332771 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCCC CGCTTTCGAC CTTAAAAAAA TCTTTCTTTA AACGCCCAAG ATACCAACGG
GTGCTCGTTT ATCTCACGAT GCTCTATTGT TGTTATGTGG CGACCTTAGG GCTCATTATT
CCTTTCGGTA TGGTGTCTTT CGCACCTGAA AGACTCTCTC AATTGCTAGG CCGTCAAGTG
ATAATTGATG ACATTCGTAT AAATCCATTC ACATTTAAAG TAAACATTGA CGGGCTGACT
ATTAACGAAA AAGATGAAAA AACCTTTGTC TCCAGTAAAG GGATCCAGCT CCAACTTAAC
TTTTGGCAAT CTATTTTTAA AAGGGCGCTG GTTATTGAAA ATCTTCATCT ACAAGAACCC
AATATTCATA TCCACCGTTT TCAAACACAA GATAAAGCAG CATTTAATTT TGACGATATA
TTGATAACCC TTAACGAAAA TATCGCCCCC ACAACGCAAC ATCAGTCCAA TGAGCAAACT
AAACCGCTGC GAATATTACT CAGCCTATTT ACCTTAGATG CTGGTAAGTT TAGTTTCGAT
GACAATATCA CCCAAGCAAA CATCAATTAC CCAAGCATTA ATATTAAAGT CAGTCAATTA
GATACTGACT ATATAATGAC AACAACGACA TCAGCGTTGA AAGATACGTT AGCGTCCTCG
CTCGAAACAC TAAAAAGAGA ACCCACTCCA GAGGCCAGTC CTTCTGCCTC GACAGAAATA
GTCTCCTCAA ATGTCATCAA TAATCACTTT GCAATGCAAT TTAAGGATGT CCATGAAGGA
GAAATAAGCC TAGAAGGGCA ATTTCAACTC TTCCCGTTTA TGCTCGACGG TGATATCCAA
ATCGCAAAGT TAAAACTCAG TACAGTGTGG CAATTTATCG ATGACCACTT TGATATTACG
CTTAAAAATG GCGAAATAAG TGCAAAGTCA CATTATCGGG TTGATCTACC TGATAATGGC
TCTCTACAAG TCATGACTAA TCGTGGACAA GTGATCCTTG AGAAGCTCAA TGTGACAAAC
CAAGACACTC CAGTCCTGAC GCTTCCTCTA CTGGCAATAG ATGGCATTGC AGCCGATCTG
CAACGGCAAA AAATTAATAT CAACCAAATA TATAGTGATG GATTATCCCT CAATGTGATC
CTCGATGAAC AAGGTGTTGA TCTTGCAAAA CTCCTAACCC CAAAATCGAT GGCACAATCT
CAAACGTCTA CGGCTAAAAA GGCTAATGAT CCCACTCAGG CACCAAATGA AGAAACTAAT
AAAGAAGATT TGGCGATATC TCCAACCTTA GCAAACACTG CGGATAGACA GCACACAAGT
GAACAACTCA CGCCCTCATG GTTAGTCCAA CTCGATAAGC TCACCCTTGA AAACTATGAT
GTTAATTTCA GTGAACAAAA ACTCACGCCT TCACCTCAAC AATGGCGCAT ATACCCACTC
AATTTTGCCA CTAAGACCAT AGTGAGTGAC TTAAAAGCAC CTATCGAATA TGAACTATCC
TTTGCTATCA ATGATAAAGG GAGTTTCGCA TCACAAGGGC AAGTTGATCT AACCAGTGAG
TCCATTGATG CCAAATTGCA AATGGATAAA CTGGCATTAG CGCAATTTCA ACCTTATTTA
GCGCCCTATG TAAATATCAA GCTTAAAAGT GGCCTCTTGA GTTCACAGGG ACAGGTAAAT
GCCGATGCTA AAGGCCAAGC AATTTATCGC GGCAGTGTCG AGCTGGATGA CTTGAATGTG
CTAGATAATT TACGCAATGC GCCATTAGTT AAATGGCAAA AAATGCATAT TAATCAGCTA
GATTTTGACC AGCAAAAGAA TCAAATAAAA ATTGACCATC TCGCCCTTAA TCAGCCCTAC
GCTAAAATTG TTATTGCCAA GGATAGAAGT ACAAATATCA GCAATCTGAT TGTTGAAACG
TCCGCTGATA ACACTTTGGT CGTAAAAACA CCGTCTAATG TTACCGTCCC CGAAACGGCA
AATTCTGACA TTAAAAATAC GGGTAACCAA ACTCGTGAAA GTGTTACTCA AAACAAACCT
GAGTTAAGTT TAGACATTCA AAAAATCAGC TTTAGTCAAG GCTCAGCCTA TTTTGCCGAT
AATTCTTTAA CGCCCAATTT TGCTTCTGGT ATTGAACTGC TTGATGGGCA TATAAGTCAT
CTATCTTCAA CTCCAGGAAC AAAAGCTTCT GTTGATATCA AAGGTAAAAT TGATAAATAT
GCCCCCGTGA CTCTAAAGGG GGATATTAAC CCCCTGTTGG ATATGCCCTA TCTTGATCTC
GATCTCGTAT TTAAGAGTGT TGAACTCACA TCCGTGAATC CCTATTCAGG AACCTATGCA
GGTTATTATA TTGATAAAGG TCAACTCTCC CTCGCGCTCA ATTATAAACT TGAGCGTAAC
CAGCTAAAAG GCACTAATCA CTTAGTCATA GATCAACTAA AACTCGGCAA GCCCAGTAAT
AGTGACTTAG CCACAAGTCT CCCCATTACG TTAGCCATTG CATTATTGCA AGACCGTAAC
GGCGTTATCG ATCTCGGTAT GGAAGTTTCA GGAGATTTAG ATTCTCCCAG TTTTAGCGTG
GGAAGTATTA TCATGACAGC CATCACTAAC GTGATCACTA AAGCCGTTAC CGCACCATTC
TCATTCCTCG CGAATTTAGT CGGCTCAAAT GAAACTTTAG ATAAAATTAG CTTCAGTGAA
GGAAGCGTTA TCCTCGATAG TAAAGCACAA GCAAACTTGG ATAAACTTGC CAATGCGTTA
ATCGATAGAC CTATGCTCAA ACTGAGCATT GAAGGTGAAG TTGATGCGAT TAACGATAGC
CAAGCAATTG CTGAACGTAT GATGAAGCGT AAATTAGCTA AACTTGCAAA TATTCCTTTT
AATGAACTCC CTACAGACTT AAGCCCAAGC CAATTCCCAA CAAAAGGAGC ACTCGCAGAA
GCCTTGGTAA AACTGTACGA ACAGGAAGTA AAAGCAGATC CGCAATTAGT AAAAGACACA
GTACTGAATG ATACAAAAGA GACATCATTA TCGGCTGAAG ATATACTGAC TCGTTGGCAT
ATCGCCCTCT ATAACTTGTC AGTTAAAGCT CAAAATGTCA CCAATGGCAT GCTAGGGGAT
CTCGCTCAAG AAAGGGCCAA AACAGTGAAA GCTTATCTAG TCGATGCCAA AGATATTTCA
CCAGAGCGAA TTTTTTTACT TGAAAGTCGA GTCACACTGA ACCCAAACGC TGCCCAAGTG
AATATGACTA TTGATGTAAA ATAA
|
|---|
| Protein sequence | MHSPLSTLKK SFFKRPRYQR VLVYLTMLYC CYVATLGLII PFGMVSFAPE RLSQLLGRQV
IIDDIRINPF TFKVNIDGLT INEKDEKTFV SSKGIQLQLN FWQSIFKRAL VIENLHLQEP
NIHIHRFQTQ DKAAFNFDDI LITLNENIAP TTQHQSNEQT KPLRILLSLF TLDAGKFSFD
DNITQANINY PSINIKVSQL DTDYIMTTTT SALKDTLASS LETLKREPTP EASPSASTEI
VSSNVINNHF AMQFKDVHEG EISLEGQFQL FPFMLDGDIQ IAKLKLSTVW QFIDDHFDIT
LKNGEISAKS HYRVDLPDNG SLQVMTNRGQ VILEKLNVTN QDTPVLTLPL LAIDGIAADL
QRQKININQI YSDGLSLNVI LDEQGVDLAK LLTPKSMAQS QTSTAKKAND PTQAPNEETN
KEDLAISPTL ANTADRQHTS EQLTPSWLVQ LDKLTLENYD VNFSEQKLTP SPQQWRIYPL
NFATKTIVSD LKAPIEYELS FAINDKGSFA SQGQVDLTSE SIDAKLQMDK LALAQFQPYL
APYVNIKLKS GLLSSQGQVN ADAKGQAIYR GSVELDDLNV LDNLRNAPLV KWQKMHINQL
DFDQQKNQIK IDHLALNQPY AKIVIAKDRS TNISNLIVET SADNTLVVKT PSNVTVPETA
NSDIKNTGNQ TRESVTQNKP ELSLDIQKIS FSQGSAYFAD NSLTPNFASG IELLDGHISH
LSSTPGTKAS VDIKGKIDKY APVTLKGDIN PLLDMPYLDL DLVFKSVELT SVNPYSGTYA
GYYIDKGQLS LALNYKLERN QLKGTNHLVI DQLKLGKPSN SDLATSLPIT LAIALLQDRN
GVIDLGMEVS GDLDSPSFSV GSIIMTAITN VITKAVTAPF SFLANLVGSN ETLDKISFSE
GSVILDSKAQ ANLDKLANAL IDRPMLKLSI EGEVDAINDS QAIAERMMKR KLAKLANIPF
NELPTDLSPS QFPTKGALAE ALVKLYEQEV KADPQLVKDT VLNDTKETSL SAEDILTRWH
IALYNLSVKA QNVTNGMLGD LAQERAKTVK AYLVDAKDIS PERIFLLESR VTLNPNAAQV
NMTIDVK
|
|---|
| |