Gene Sputcn32_1558 details

Gene Information

• Locus tag: Sputcn32_1558
• Symbol: lpxK
• ID: 5079518
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 1775796
• End bp: 1776809
• Gene Length: 1014 bp
• Protein Length: 337 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640498691
• Product: tetraacyldisaccharide 4'-kinase
• Protein accession: YP_001183082
• Protein GI: 146292658
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1663] Tetraacyldisaccharide-1-P 4'-kinase
• TIGRFAM ID: [TIGR00682] tetraacyldisaccharide 4'-kinase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.88408
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAACGC TCGTTAATAA AATTTGGTAT CAGGGCCATC CATTACAATG GCTGTTACTG 
CCTTTATCCT TTGTATTTGG ATTCATCACC TTTGTGCGCC GAGGTTTATT CCAATTAGGG 
TTAAAAGCGC AAACCATACT CCCTGTTCCT GTGATTGTGG TCGGTAATAT TACGGTAGGC 
GGAAGTGGTA AAACGCCAAT GGTCATTTAT CTGATCGAGT TATTACGTGC ACATGGTTTT 
AATCCTGGTG TGATAAGCCG TGGTTATGGT GCGAATATTG ATGGTGTTAA GCAGGTTGCC 
TATAACGCAA GTGCCACCGA TGTAGGTGAT GAACCTGCGA TGATTGTTGC ACGCTCTGGT 
GTTCCTATGG TTGTCGGTTC TAAGCGTGTA GAGGCTGCAA ATGTCCTTAT CGCTGAGCAT 
GGCGTTGATG TGATCATTTG TGATGATGGT TTACAACATT ACGCACTTGG ACGGGATATT 
GAACTTGTCG TCATTGATGG CCAACGCCGT CTAGGAAATG AGTATTTACT ACCTGCAGGG 
CCCTTAAGGG AAGGGCCTTG GCGGCTTAAA GACGTTGACT TTGTGGTTAT TAATGGCGGC 
AATGCAGATG TGGGGCAATT TGAAATGCAA CTGGCACCGA CACAGGTAAA AGCGGTGGAT 
GGTAATATCA TCACCACTGA CTTTGATAAA TCACAGCCTC TTGTCGCTAT GGCTGGTATT 
GGTAATCCCA CTCGTTTCTT CGATTCGTTA CAAGCGCAAG GCTATCAAGT GGTGTTATCC 
CACGGGTTTG ATGACCATCA AGCCTACGAT AAAAAACAAT TATGTGATTT GGCAAAAGAC 
CTTCCGCTGA TGATGACCGA AAAAGATGCG GTTAAATGTC GCGATTTTGC ACAAGAAAAC 
TGGTGGTATT TGGCGGTCAA TGCCAAGCTA TCGCCACAAT TTGATGAGCA GCTATTAAGC 
CGTCTTCACG AGGTGGTTGC TGCTAAACAA GGAAACTCTC ATGGCATTCG ATAA 

 

Protein sequence

MQTLVNKIWY QGHPLQWLLL PLSFVFGFIT FVRRGLFQLG LKAQTILPVP VIVVGNITVG 
GSGKTPMVIY LIELLRAHGF NPGVISRGYG ANIDGVKQVA YNASATDVGD EPAMIVARSG 
VPMVVGSKRV EAANVLIAEH GVDVIICDDG LQHYALGRDI ELVVIDGQRR LGNEYLLPAG 
PLREGPWRLK DVDFVVINGG NADVGQFEMQ LAPTQVKAVD GNIITTDFDK SQPLVAMAGI 
GNPTRFFDSL QAQGYQVVLS HGFDDHQAYD KKQLCDLAKD LPLMMTEKDA VKCRDFAQEN 
WWYLAVNAKL SPQFDEQLLS RLHEVVAAKQ GNSHGIR