Gene Sputcn32_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1543 
SymbolribA 
ID5079602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1761633 
End bp1762244 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content42% 
IMG OID640498676 
ProductGTP cyclohydrolase II 
Protein accessionYP_001183067 
Protein GI146292643 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.802853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATAA AATATGTCGC GACGTCAAAG TTACCCACTC CTTGGGGTGT GTTTGCTATG 
CATGGTTTTG AAGATACAGA AACAGGCAAA GAGCATGTCG CACTCACCTT TGGAACACTT 
AGTGCTGATG AGCCTGTTTT AGGCCGTATC CATTCAGAAT GTTTGACTGG TGATGCGCTA 
TTTAGCCTGC GTTGTGACTG TGGTTTTCAG CTACAAACGG CTATGCAAAA TATTGCCGAA 
ACAGGTTGCG GTTTTATTTT ATATTTACGT CAAGAAGGCC GTGGAATTGG CTTGTTGAAT 
AAGATCCGCG CCTATGAGTT ACAAGATAAA GGTGCAAATA CGGTTGAAGC AAACGAGCAA 
TTAGGTTTTC CTGCGGATAT GCGTAAGTAC GATATGATCA AACCCATGCT TGAGCAGATT 
GGTGTGAAGC ACGTACGTTT AATGACCAAT AATCCGCGCA AAGTCAAAGC GATGAAAGAG 
TTTGGTATAG AAGTCGTTGA ACGAGTTCCT CTGCAAGTGG GCAAAAACCG TTATAACGAA 
GCCTATTTAA AAACCAAATC CACAGAGCTA GGCCATATGA TGTCCGAGTA TCATTTTGTA 
GATGAAGACT AA
 
Protein sequence
MSIKYVATSK LPTPWGVFAM HGFEDTETGK EHVALTFGTL SADEPVLGRI HSECLTGDAL 
FSLRCDCGFQ LQTAMQNIAE TGCGFILYLR QEGRGIGLLN KIRAYELQDK GANTVEANEQ 
LGFPADMRKY DMIKPMLEQI GVKHVRLMTN NPRKVKAMKE FGIEVVERVP LQVGKNRYNE 
AYLKTKSTEL GHMMSEYHFV DED