| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1538 |
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| Symbol | |
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| ID | 5079597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1756206 |
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| End bp | 1757168 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640498671 |
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| Product | patatin |
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| Protein accession | YP_001183062 |
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| Protein GI | 146292638 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.546797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAGGG GAACGTCACC CACTATTGGT ATTGCCTTAG GTAGTGGAGC GGCAAAAGGG
TGGGCACATA TTGGTGTATT AAATGGACTA GCGGCTATGG GGGTTAAGCC TGATAAAGTT
GCGGGCTGTT CTATAGGGGC GTTAGTTGGT GCCGCATACG CCCATGACCA TTTACCTGAA
CTTGAAGAAT GGGTACGAAG CTTTTCCAGT TGGGATGTTT TAGGATTGAT GGATATTCGT
TGGCGAAAAG GGGGCTTGAT TGGTGGCGAT AAAGTCTTCG ATGTACTGCA ATCCCGTATT
GGTGATGTGA AGATTGAGGA GCTTAATCGT CCGTTTGCTG CTGTGGCAAC CGATTTATAT
TCAGGGCAAG AGATTTGGTT TCGCCATGGG GATTTACGCC AAGCGGTTAG GGCTTCTTGT
TCTATGCCCG GTATTCTAGC ACCCGTTCGA CAAGGTGAAC GCTGGTTAGT GGATGGTGCA
GTGGTAAATC CTGTTCCCGT GTCGGTGAGT CGTGCAATGG GGGTCGATAT TGTGATTGCC
GTTGATTTAA ATGGATATCA TCCGGGACGA TTACAGGTTT TGCCTGTTAA TATGACAAGT
CATAAGGCCA CTCAAGGAGA AATGGATTTG CCTGCTAGAC AGGATACGGG ATTTATGGAT
TTATTTGCCC GTGGCAGAGA ATATGTGAGT AGTTTGACGG ATAAGTTTTC CCTTGGTACC
AAATCTAATC CGGGCATGAT TGCTGTGATG TCGCAATCAA TGGGTATTTT AGAGCAAAGG
CATAAGCGAT CGCGTTTAAT GGGTGATCCT CCCGATATTT GTATCGTACC CGAAGTGGCC
GAGATAGGAA CAATGGAGTT TCATCGTGCC AGTGAGGCGA TTGCCGCTGG TGAAGCTGCT
GTCGCGAAAG TGGCTCATTT GATTGAAGCG GCATTATGGC GGGGAAACGA GCATAGAGAA
TGA
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| Protein sequence | MVRGTSPTIG IALGSGAAKG WAHIGVLNGL AAMGVKPDKV AGCSIGALVG AAYAHDHLPE
LEEWVRSFSS WDVLGLMDIR WRKGGLIGGD KVFDVLQSRI GDVKIEELNR PFAAVATDLY
SGQEIWFRHG DLRQAVRASC SMPGILAPVR QGERWLVDGA VVNPVPVSVS RAMGVDIVIA
VDLNGYHPGR LQVLPVNMTS HKATQGEMDL PARQDTGFMD LFARGREYVS SLTDKFSLGT
KSNPGMIAVM SQSMGILEQR HKRSRLMGDP PDICIVPEVA EIGTMEFHRA SEAIAAGEAA
VAKVAHLIEA ALWRGNEHRE
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