Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1535 |
Symbol | |
ID | 5079594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1753482 |
End bp | 1753991 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640498668 |
Product | hypothetical protein |
Protein accession | YP_001183059 |
Protein GI | 146292635 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.156288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATCAT TAAAATACCT CAACGGCTAC AGTCCTGATA TCCAAGACCA AGTGCAACAG CTACTCGATG CAGGTACCCT ACCAAATGTA CTTTTGCGTC GTCACCCTAA AATCCATGAT ATTCGTAGTG ACAAAGCGCT CTATGACTAT ACCCAAGAGA TAAAAAACAG TTTTCTACGT CAATCATCAC CATTATCAAA AGTGATTTTT GACGATAAAA TTAACATTAG TCATCATGCA CTTGGCTTGC ATTCCTATGT AGCACGAGTT CAAGGCAATA AAATCAAAGC GAAGAACGAA ATTCGCATTT CTTCGCGTTT AAAGCGTGTA CCAGAACCTT TGTTGCGTAT GGTCGTCGTA CATGAATTAG CCCATTTAAA AGAAAAAGAT CACAACAAAG CTTTCTATAA TTTGTGCATC CATATGGAGC CGGATTATCA CCAGTTTGAA TTTGATTTAC GCTTATTATT AACTTGTATC GACGCTAACA TATCCCCTTA TTCTGCTTAA
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Protein sequence | MQSLKYLNGY SPDIQDQVQQ LLDAGTLPNV LLRRHPKIHD IRSDKALYDY TQEIKNSFLR QSSPLSKVIF DDKINISHHA LGLHSYVARV QGNKIKAKNE IRISSRLKRV PEPLLRMVVV HELAHLKEKD HNKAFYNLCI HMEPDYHQFE FDLRLLLTCI DANISPYSA
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