Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1533 |
Symbol | |
ID | 5079592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1751294 |
End bp | 1752589 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640498666 |
Product | peptidase M23B |
Protein accession | YP_001183057 |
Protein GI | 146292633 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00239746 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGACAG GCAAACCCAA TTTGATCAAT TTTTCGCAAC CCCGTTTGCA GAATTTATCA TCAACTCATA AGAATATTCT ATTAGTGGGC GGTTTATTGA TCGGTGCAGC TATGCTATTA CCGAATAATA ACCATGTCGT GCCAACAACT CAGCGTATCC CTGTCGTTCT TGATATTGAG AATATCTTAC CTCAGACTTC TGAATCTATT GAACAAGCTG CTATCATAGA TAATACGCCT GATTTTGAGC GTATTATCGT TTCTGGAGAT ACCCTAAGCG GTCTATTTTC AAAAGCAGGT GTTGATCATC AAACTATGTA TAGGGTGTTG GAAGCCGATC TCAATATTCT TGCCCTTGAT ACCTTATTAC CTGGTAACCG GATCCAGTTT TGGCTGGATA ATGATGGGCA ATTACAAAAG TTAGAGTTGT ATTTTAATGC GGCACGCCAA GTCGTATTTA CTCGTTATGA GGATGGCAGC TTTAACGTTG AAGAAGTCAA CGTAGAAGGT GTTTGGCAAA ATCGAATTTT AACGGGTGAT ATTAAAGGTT CATTTTACGT ATCAGCACAA AAAATGGGGT TAGCTGCTGC GGATATTCAA CGTATTGAAG ATTTACTCAA AGAGAAAGTC AATTTCGCGC GTGACTTGCG TGCAGGCGAT AAGTTTTCGG TTTTGGTAAA TGATCAATAT GTTGAAGGTG AAGCGACAGG AAGCAGCCAG ATATTGGGCG TAACAATTAA AACTGGCCGT TCTGAAGTGA GTGCTTTTCA GCATACTGAT GGTAGTTATT ATGATGCGAA AGGGCAGAGT TTGGTTCGTG CATTCCAGCG TATTCCATTA GCGAAACAAC CTCGTATGAG TTCTCGTTTT AATGCCTACC GTAAACACCC TATTACTGGT CGAATTTCTC CCCATAATGG TACGGACTTT TCAGTGCCTA TTGGTACTAA GGTGATTGCA CCGGGTGATG GCGTTGTCAG TTTAGTAACG GATCATCAAT TTGCAGGTAA ATATATTGTT ATCGAACATG GTGGTAAATA CCGTACCCGT TATTTACATC TTTCCAAATC CCTTGTACGT AAAGGTCAGC GAGTGACTCG AGGGCAAGTG ATTGCTTTAT CAGGTAATAC CGGCCGTTCA ACGGGCCCAC ATTTGCATTA TGAGTTCCAT ATTAATGGTA AACCAGTTGA TCCTATGAAA GCGGATATCC CAATGTCTAG TCAATTAGCA AATCAAGAAC TGAGAACCTT TACAAATTTG GTTAAGAGCC GCCAAGCTTT AATGGATTTA GGTTAA
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Protein sequence | MQTGKPNLIN FSQPRLQNLS STHKNILLVG GLLIGAAMLL PNNNHVVPTT QRIPVVLDIE NILPQTSESI EQAAIIDNTP DFERIIVSGD TLSGLFSKAG VDHQTMYRVL EADLNILALD TLLPGNRIQF WLDNDGQLQK LELYFNAARQ VVFTRYEDGS FNVEEVNVEG VWQNRILTGD IKGSFYVSAQ KMGLAAADIQ RIEDLLKEKV NFARDLRAGD KFSVLVNDQY VEGEATGSSQ ILGVTIKTGR SEVSAFQHTD GSYYDAKGQS LVRAFQRIPL AKQPRMSSRF NAYRKHPITG RISPHNGTDF SVPIGTKVIA PGDGVVSLVT DHQFAGKYIV IEHGGKYRTR YLHLSKSLVR KGQRVTRGQV IALSGNTGRS TGPHLHYEFH INGKPVDPMK ADIPMSSQLA NQELRTFTNL VKSRQALMDL G
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