Gene Sputcn32_1517 details

Gene Information

• Locus tag: Sputcn32_1517
• ID: 5079576
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 1735113
• End bp: 1735895
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640498650
• Product: hypothetical protein
• Protein accession: YP_001183041
• Protein GI: 146292617

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00311608
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAAGG TAAGCAATAG AACAAAAATC GCTACTGCAC TTGTCGGCGT GTTGGCATTA 
GCGAGTAGCA ACTTAGTAGT TGCAGATCCT CTTACCGACG TGCTGAAAGC GGATAGTATG 
ATCCATGCTG ATGCAGCTGC GTCGCAAAAG AATGTTGATA AGTATTTTGA TCAAGCGCAA 
GACATGCTCT TTGAGTATGG CTCAGTGGCT GATGAGCGTG AGTCTCTGAA ATCATATAAT 
GACTATGTAG CCAGTTTAGT CGCTGATCAG CAAAAGACAA TGGACGCTGT TCAAAACGAC 
ATTAATGGTG TTGACAAGTT ACGTCAGGGT GTTGTGCCGT TAATGTTCAA AATGGTGGAA 
TCTTTAGAGC AGTTTGTTCA ACTGGATTTA CCATTTAACT CTGAAGTGCG TACCAATCGT 
GTCAATGAGT TAAAAAATCT CCTCAATACA GCCGAAGTGA CTCTCGCTGA AAAATACCGT 
TTGATCCTTG ATGCTTATAG TATTGAACGT GAATACGGTA GTGCTATTGC TGTAAACCAA 
GGCAAATTGA ACTTAGATGG TAAAGAAGTA TTAGTTGATT TCTTTAATTT AGGTCGTGTA 
GCGCTCTATG CCCAAAGCTT AGATCAAAAG ACTGGCTGGA TATACAACTC AGATACTAAG 
GGTTGGGATA AATTAGATGA CAGCTATTTG CGCGAACTGA CAAAAGGTAT CCGCATTGCC 
CGTAAACAAG GCGCTCTAGA TCTATTTGCA TTACCAATTC CTGCTGCGGA GACTGCACAA 
TAA 

 

Protein sequence

MSKVSNRTKI ATALVGVLAL ASSNLVVADP LTDVLKADSM IHADAAASQK NVDKYFDQAQ 
DMLFEYGSVA DERESLKSYN DYVASLVADQ QKTMDAVQND INGVDKLRQG VVPLMFKMVE 
SLEQFVQLDL PFNSEVRTNR VNELKNLLNT AEVTLAEKYR LILDAYSIER EYGSAIAVNQ 
GKLNLDGKEV LVDFFNLGRV ALYAQSLDQK TGWIYNSDTK GWDKLDDSYL RELTKGIRIA 
RKQGALDLFA LPIPAAETAQ