| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1516 |
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| Symbol | |
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| ID | 5079575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1731880 |
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| End bp | 1734681 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640498649 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001183040 |
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| Protein GI | 146292616 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000131421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAGAA GTAATTTATT AGCTAATTCA GTGCGATTAG CATTAGTTGG TGGCGCCGCT
GCTGTAGCAT TAACAGCACC AATGGCATTT GCAGCAGAAG ATGGTGCAAA AGTTGAACGT
ATCGAAGTTA CTGGTTCTCG TATCAAACGT ACAGATATGG AAGCAGCCAG TCCTGTTTTA
GTGATGAATC GTGAAGAGAT TGCTGCTACA GGTCTAGTTA GCCTTGGTGA TATTTTACAA
ACAATCCCAT CAGCGGGTGC TGCGTTAAAC ACTGCATTTA ACAACGGTGG TAACGGCTCG
ACTAATATGG ACCTTCGTAA CTTAGGTTCA CAACGTTTAC TTGTGTTGGT TAATGGTCGT
CGTTGGATCT CATCTCTTGG TTCTACTGTT GATATGAACA CCATTCCAAC AGCTGCAGTT
GAGCGTATTG AAGTGCTTAA AGATGGTGCT TCTGCTGTGT ATGGTTCAGA TGCTATTGCT
GGTGTTGTAA ACATTATCAC TCGAAAAGAT TTCGAGGGTG TTGAAGTTTC TGTTTATGGT
GGTGAAAACT TAAGCGAAGG TGATGGTCGT CAATATACAA CTGACTTGAC ATTTGGAATA
AGTGGTGAAA AGGGCGGTCT TTTGTTTAAC ATGAGCCATG TTACTCAACA ACCTATATGG
GCTGGTGACC GTGATATTTC CGACACAGGT TTTAGTAGTA CCACGGAAAA TACTCGACTC
AGAGTGAAAC CGTCAACATT ATCTCAGGCA AATCAAGATG GACTAACTGC TGCAGGTTAT
GCTGTTAGAA GTAATGGCCT TTATGATTTA ATGTCCTTAC CTGGCACTGG TGCTGATACA
GGTCTTGATA AGTTTCGTGA TCGTACAGGT AGTGATGTGT ATAACTATGC ACCGGATAAC
TATTTAGTTA CACCACAGAA TCGTAATGCC TTCTATGTTC AAGGTTATTA TGATTTAGCG
GATAATTTAA GATTAGTCAG TGATTTTATG ATGACTAACC GTAAATCAGC ACAAGAGCTT
GCTCCTATGC CTGTTACTTT AGGCGCTTCA TTTGGTGCTG CAGCAAGTCG TGTAGATATC
CATGCAGATA ATATCTATAA CCCATTTGGA CAGACGTTGT ATGGTGATTC TGCTCGTGCT
GTAGCTAATG GTGAAGCGGC AGGTTATGTA CCTTACGCCT TGCAGCGTCG TATGCTTGAG
GCTGGTTCTC GTCGCTATGA ACAAAATGAT GTGACATATC GTGCCATGGT CGGCCTTGAA
GGTAATATCA ATGATAATTG GAGCTGGAGT GCTCATTATA TTTACGGTCA AAATACCCAA
GATGAACTAA CAACAGGGCT TCTAAATTTA ACGCGAATCA ATCAAGCTCT AGGTGCTAAT
TGCGATACGA GTACGTCTTG TACACCGCTC AATCTTTTTG GTGGGCCGGG AAGTATCACC
GATGAGATGG TTGATTACAT CACCTTTGAT TCTGTTGGGC GATCAGGTTT AACCATGAAA
GATTATGCCT TCAACATCTC AGGTGACATC TTTGATTTAC CCGCAGGTAG TGTGGGGATG
GCAATTGGCT TAGAACGTCG TGAAGAAACG GGTTATGATA CACCAGATCC ATTAACTGTA
ACTGGTGAGT CTTCAGGTAA CCAACGCGAT GCAACATCGG GTGGTTTCCG TTTAGATGAG
GCTTATGTTG AGTTGTCTAT TCCTGTTATC GATAGTTTAG TTATTACACC TGCTACACGA
TATTCAGATC ATGATGTCTA TGGTGATAAT ACGAGTTCAA AAGTGGGCGC AGAATTCCGT
CCTATGGATG ATTTATTACT CAGAGCTACA TGGGCTGAAG GCTATCGTGC GCCATCTATT
TCAGATTTGT ATGCTGGTAA TGCTGACTCA TATCCTAGCT GGACAGATCC TTGTAATACA
AGAACTAGTA GCGGTGCTGT TATAGATGTC TCTGGTAAGC CAGGTTGTTC AGCCGTACCA
GATGGTTATC GCCAATCAAA TACTCAGATC CGTATAACTC AGGTTTCATC ACCTGATTTA
AAACCAGAAA CATCTGAATC GGTAACGGCT GGTTTTGTAT ATAATCCATC GTGGCTTGAA
GGAGCAGAGT TAACCTTTGA TTATTACAAT ATTAAGGTTA AAGATGCGAT TGGTCGTTAT
GGTTACAACC GTATTGCAAC TGAATGTGCA GAGGGAACTA ATCCAGCAAC ATGTAGTGCA
ATTGATCGTG ATTCTTTAGG TAATATTGTT GATCTGCGCA ACTACCTATT AAATGCTAAT
AATTACGATG TTAGCGGTGT TGACATGTAC ACAGGTTATC GTTTTGAAAC TGGATTTGGT
AGTTTTAAAA CCTCCTTGGA TATGGCTTAT GTTATTGACA ACAACTTCAA TGGTTATAAC
CAAGTTGGGC AGCAATATGG TGATGGTGGA TATCCTCGTA TTAAAGCAAA CTTCTATATA
GACTGGGCTA TGGGTGATTG GGATGCTCAC TGGAAAACCC GTTATGTACA TAGCATGATG
AACAACTATT ATGTTGATGG CGTTTATGAG GATTATGGTA TACCTGAAAG TGATTTTACC
AAGAAGTTTG ATGCTTATAT GGTACATAAT ATTTCTGTAG GCTATTCATT TGCTGAATAC
AACACAAATG TTAGCATAGG TATTAATAAC TTATTTGCGG AAAAGCCAGA GTCAGAGTAC
ATTAACAATG ATATGGCAAT GTCTACCAAC AACTTCTCTG TTACTGAGTA TGATGTGAAT
ATGGATCGCT TCGTTTATTT ACGTGCAACA GTTAAGTTTT AA
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| Protein sequence | MLRSNLLANS VRLALVGGAA AVALTAPMAF AAEDGAKVER IEVTGSRIKR TDMEAASPVL
VMNREEIAAT GLVSLGDILQ TIPSAGAALN TAFNNGGNGS TNMDLRNLGS QRLLVLVNGR
RWISSLGSTV DMNTIPTAAV ERIEVLKDGA SAVYGSDAIA GVVNIITRKD FEGVEVSVYG
GENLSEGDGR QYTTDLTFGI SGEKGGLLFN MSHVTQQPIW AGDRDISDTG FSSTTENTRL
RVKPSTLSQA NQDGLTAAGY AVRSNGLYDL MSLPGTGADT GLDKFRDRTG SDVYNYAPDN
YLVTPQNRNA FYVQGYYDLA DNLRLVSDFM MTNRKSAQEL APMPVTLGAS FGAAASRVDI
HADNIYNPFG QTLYGDSARA VANGEAAGYV PYALQRRMLE AGSRRYEQND VTYRAMVGLE
GNINDNWSWS AHYIYGQNTQ DELTTGLLNL TRINQALGAN CDTSTSCTPL NLFGGPGSIT
DEMVDYITFD SVGRSGLTMK DYAFNISGDI FDLPAGSVGM AIGLERREET GYDTPDPLTV
TGESSGNQRD ATSGGFRLDE AYVELSIPVI DSLVITPATR YSDHDVYGDN TSSKVGAEFR
PMDDLLLRAT WAEGYRAPSI SDLYAGNADS YPSWTDPCNT RTSSGAVIDV SGKPGCSAVP
DGYRQSNTQI RITQVSSPDL KPETSESVTA GFVYNPSWLE GAELTFDYYN IKVKDAIGRY
GYNRIATECA EGTNPATCSA IDRDSLGNIV DLRNYLLNAN NYDVSGVDMY TGYRFETGFG
SFKTSLDMAY VIDNNFNGYN QVGQQYGDGG YPRIKANFYI DWAMGDWDAH WKTRYVHSMM
NNYYVDGVYE DYGIPESDFT KKFDAYMVHN ISVGYSFAEY NTNVSIGINN LFAEKPESEY
INNDMAMSTN NFSVTEYDVN MDRFVYLRAT VKF
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