Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1515 |
Symbol | |
ID | 5079574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1729902 |
End bp | 1731110 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640498648 |
Product | porin |
Protein accession | YP_001183039 |
Protein GI | 146292615 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000337456 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAA CGTTAGTAGC AACTGCGCTG GCAGCAATAT TCTTAGCGCC ATCTGTTTCG GCAATTGAGA TCTATAAAGA TGATAAAAAT GCTGTAGAAA TTGGCGGATT TATTGATGTA CGCGTAATCA ACACTCAAGG GGAAACTGAG GTTGTTAATG GTGCTTCTCG AATTAATTTC GGCTTTAGCC GTGAGTTGAC CAATGGTTGG AATGCATTTG CTAAGTTGGA ATGGGGTGTT AATCCTGTTG GTAGCAGCGA TATTGTTTAT AACAACCGTT TTGAATCTGT TCAAGATGAG TTTTTTTATA ATCGCTTAGG TTATGCCGGT TTATCCCATG ATCAATACGG TACTATTACC ATTGGTAAAC AATGGGGTGC TTGGTATGAC GTAGTATATA GCACTAACTA TGGTTTTGTA TGGGATGGTA ACACCGCAGG TGTTTACACA TTCAATAAAG ACGATGGTGC AGTCAACGGT GTTGGTCGGG GTGATAAAAC CGTACAATAT CGTAATGCTT TTGGTGATTT CAGTTTTGCT GTTCAGGCCC AGTTAAAAAA CAGCAGTTTT TTCACTTGTG ATATAGAAAA TATTACTGAA AATGAGTGTG AAGCCCGCTG GATTGAAGGT GGTGCTGATG CTCAACAAGT GACTTATGAC TATACCTATG GTGGAGCGTT GACCTATAAA GTCACTGAGA TGCTGAGTGT GAGTGCTGGT GTTAACCGCG GTGAATTTGA TATCGACTAC GGGAACGGTG ATCAAAAAAC GGCAGTTGAT CTTATCTATG GCGCAGGTAT TACTTGGGGT AACTTCGACA ATAACGGACT CTATATCGCG GCTAACGTTA ACAAGCAAGA AAACCATGAT ACAGATAATA TTGGCCGTTT AATCAAGGAT GCACAGGGCG CTGAAACTTT AGTGTCCTAT AAGTTTGATA ATGGTCTGCG TCCATTTATT TCTTACAACG TGCTTGATGC TGGTAAAGAT TACGTGATCC AACCTAACTT TAATGCAGAT CCTGATGATG TGTTCAAACG TCAGTTTGTG GTTGTTGGTT TGCACTTTGT TTGGGATCCA AACACCGTCC TCTATGTTGA AGCTCGTAAA GACTATAGTG ATTTCACTAG TACCGATAAA GTTCAAGAAG CGAGAATGTC ACTATCAGAA GATGACGGCA TTGCCATTGG TATTCGTTAT ACACTGTAA
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Protein sequence | MNKTLVATAL AAIFLAPSVS AIEIYKDDKN AVEIGGFIDV RVINTQGETE VVNGASRINF GFSRELTNGW NAFAKLEWGV NPVGSSDIVY NNRFESVQDE FFYNRLGYAG LSHDQYGTIT IGKQWGAWYD VVYSTNYGFV WDGNTAGVYT FNKDDGAVNG VGRGDKTVQY RNAFGDFSFA VQAQLKNSSF FTCDIENITE NECEARWIEG GADAQQVTYD YTYGGALTYK VTEMLSVSAG VNRGEFDIDY GNGDQKTAVD LIYGAGITWG NFDNNGLYIA ANVNKQENHD TDNIGRLIKD AQGAETLVSY KFDNGLRPFI SYNVLDAGKD YVIQPNFNAD PDDVFKRQFV VVGLHFVWDP NTVLYVEARK DYSDFTSTDK VQEARMSLSE DDGIAIGIRY TL
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