Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1508 |
Symbol | |
ID | 5079566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1721560 |
End bp | 1721943 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498640 |
Product | helix-hairpin-helix repeat-containing competence protein ComEA |
Protein accession | YP_001183032 |
Protein GI | 146292608 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region [TIGR01259] comEA protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCA AAAACTGTTT ATCCACAATG CTCAGCAACA GTGTTAAATC CATTCAGATA AAGTCGATGT TAGGCGTTAC GTTAGCGGCT TTACTCGCAT ACCCTGTGAG TGCCGCAGAA GCCCCCACTA AAGCGGAAGC AAAAATGCAG GCTCAGGCAA AAGCAGATGC AAAGTCTGCT GTGGCTGAAG TGTTGACAGT GAATATCAAT ACGGCTTCTG TTGAAGAGTT ACAAGAGCTT AAGGGGATTG GTGCTGCCAA GGCGCAGGCT ATCGTAGACT ACCGCACACA AAATGGTAAG TTTAATGCGA TTGATGATTT AGCAAATGTG TCTGGTATTG GTGCAAAACT GATTGAGCAG AATCGACATT TAATCAAACT CTGA
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Protein sequence | MKIKNCLSTM LSNSVKSIQI KSMLGVTLAA LLAYPVSAAE APTKAEAKMQ AQAKADAKSA VAEVLTVNIN TASVEELQEL KGIGAAKAQA IVDYRTQNGK FNAIDDLANV SGIGAKLIEQ NRHLIKL
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