| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1499 |
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| Symbol | |
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| ID | 5079557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1711709 |
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| End bp | 1712740 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498631 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001183023 |
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| Protein GI | 146292599 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCGAT ATCTGCTTCG GCGGCTCAAT CTGTTTATCG CAACGTCCTT CGTTATGATT
GGAGTGCTCT TCTATGCTAC CGGATTATTT CCCGTTGAAC GAAGTTTTGC ACTCACAGGC
ATCCATTCTC CTACCGCCAG CCAAGAGATT CAAATTGAGC AAGATTATCA ACTAAACGAC
AATCAAGCTT GGCAATTTTT TGCCTATATA AAACAAAGGT TAAGCGGTAA TTTAGGGGTA
TCGGTTACAT CACAACAAAG TGTCGCTGAA GAGTTAAAAA CGGTACTCCC CGCATCATTT
GAACTCGCGA TAATGGCTGC CATTATCGCC ATTGGCTTAG GTGTGCCATT AGGCGTTTTA
GCATCGCAAA GCCAACATAA ACTTACTCAA AATACGATCA TGGCAATCAC CTTAACAGGC
TACTCAGTGC CTGTTTTTTG GCTAGGTCTC TATTTATCCC TCTGGTTCGG GGTTAATCTT
GGTTGGTTAC CGATTTCTGG ACAAATCAAT TTGCTCTATG AAATCAAGCC TGTTACAGGC
TTTATGTTAG TCGATACCTT GTGGTCAGAT TCTGAATATG GCAAATCGGC ATTTAAAGAT
GCGCTGCTGC ACATCATTTT GCCAGCGACT ACGCTTGCCG TATTACCTTT TACAGTGGTG
GTTCGTAGCA CTCGTTCGGC AATGATGAAT GTGATGAATC AAACTTTTAT CCGTGCCGCG
GAGGCGAGAG GCATGCATAC TAGCACTATC ATTCTACGCC ACGCGCTACC TAATGCGTTG
ATCCCTGTGC TTAAACATTT AGGATTGATG CTCGGTTCTT TTGCCAGCTA TGCGATTGTC
GTCGAAATGA TCTTCTCATG GCCAGGTGTC GGCTCATGGT TGGTGTCAGG AATTTATCAA
CGGGATTATA CTGTTATCCA AGGTGGTATT CTGGCCGTTG CCCTATTGAT CATCTTTTTA
AGTATCTTGA TTGAAGTATT ACACACTGTC TTTAATCCAT TAAGCAGAAA AGACCTTTAT
GCTACCAGCT AA
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| Protein sequence | MFRYLLRRLN LFIATSFVMI GVLFYATGLF PVERSFALTG IHSPTASQEI QIEQDYQLND
NQAWQFFAYI KQRLSGNLGV SVTSQQSVAE ELKTVLPASF ELAIMAAIIA IGLGVPLGVL
ASQSQHKLTQ NTIMAITLTG YSVPVFWLGL YLSLWFGVNL GWLPISGQIN LLYEIKPVTG
FMLVDTLWSD SEYGKSAFKD ALLHIILPAT TLAVLPFTVV VRSTRSAMMN VMNQTFIRAA
EARGMHTSTI ILRHALPNAL IPVLKHLGLM LGSFASYAIV VEMIFSWPGV GSWLVSGIYQ
RDYTVIQGGI LAVALLIIFL SILIEVLHTV FNPLSRKDLY ATS
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