| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1494 |
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| Symbol | |
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| ID | 5079649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1705305 |
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| End bp | 1707161 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498626 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001183018 |
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| Protein GI | 146292594 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000429603 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAGA AGATCCGCGA CGGTTCGCAA GGCGTGATTG CTAAAAGCAT TCTCGTACTT
GTGATTTTAT CTTTTGCATT TGCAGGTGTG AGTAGCTATT TGGGCTCAAC CACTGACGTA
CCCGCTGCAG AAGTCAATGG TGACAAGATC ACTAAAGCCG AGTTAGAGCA AGCATATCAG
AGCGAGCGCT CTCGTATGGA GCAACAACTG GGTGAGATGT TTGCTGCATT ATCTGCTGAT
GAAAGATATC TAGAAAGTAT TAAGCAGAGC GTATTAGAGC GTTTGGTTGC CGATAAACTT
ATCGACCAAG CGGCGAGCAC TATGGGTCTT CGAGTTTCTG ATGAGCAAAT TATTACTGCC
ATTAAGTTAG AGCCTGCTTT CCAAACCGAT GGCAAATTTG ATAACGAGCG TTATCAAGCG
ATTTTGCGCC AGTTAGGTTA TCAACCGCAA AGCTTTAGAA ATATGATGCG TGTTGATATG
ACTCGCCGTC AGTTAACTGC CGCCCTTGTG GGTACTGAAT TTGTGCTCCC AAGCGAAGCA
AAGCAATTAG CTGAGTTACA AGGTCAAACT CGTGATATTC GTTATTTGGT GGTGGATTCT
GCACCATTTT TAGCCAATGC CACCGTGACC GATGAGCAAG TTAAAAACTA CTATGATGCA
AACCAAGGGC AATTTATGAG CCCAGAACAG GTAAGCTTAG AGTATGTTGA GCTAAACGCT
GCTGATTTTG CTAAAAATAG TCCTGTGACT GACGAAGAAG CACAAGCTTA TTATGATGAA
CATAAAACGC AATATCTGGC TAACGAGAAG CGTTTAGCTG CACATATCCT CATTAATGCA
GATCAGGATG ATGCAGCGAC CAAAGCTGCT GATTTAGCCA AGCAACTCGA TAATGGTGCA
GATTTTGCTG AACTTGCTAA GGCGCATTCT GACGATAGAT TAAGCGCAGA GCAGGGCGGT
AAACTGGAGT GGTTTGAACC TGGTGTGATG GAGCCTACCT TCGATGCGGC TTTATTCGCA
CTCAATAAGG GCGAGCATTC TGCGGTTGTT AAAACGGGCT TTGGTTACCA CATTATCAAG
TTACTTGATG TACAGGCGGG TGCGACAGTA CCATTTGCCG ATGTTAAAGC CAAAATTGTC
GCTCAGTTGC AGGATAAGAA AGCAGTAGAT CAGTTCTACA GTCTGCAAAG TAAGTTAGCG
GATACCAGCT ATGAAGTTCC TGATACTTTA GCTGAAACGG CAAAAGTGCT TGGCGTATCA
ATTAAAACTA CGCCACTATT TTCTCGTGAT GATGCACCTG AGGGGCTTAA TAAACCTGAT
TTAGTGAAGG CCGCCTTCTC TGATACCGTT AAGTTGAAAG GTTTAAACAG TGAAGTGATT
GAGCTTGAGC CTAATCACGT GGTTGTTATC CGTGTTAAAG AGCATCACGA TGCGGGCACT
TTAGCCCTAG CGGAAGTGAA AGCCAATATC ACAGAGCGTT TGAAGCAGGA CCAGGCGAAT
GAAGCTGCCC GTGCAAAAGC ACAAGAGTTG ATGACACAAG TTAAAGCTGC TGCAACTGAC
CTTGGTTTAG TGTCTAAAGT GAAGCTAGGC CGCGGCGAAC AAAATGTGGA TGCTGCTATT
GTGGGTAAAG CGTTCCAAAT GCCAACACCT AGCAGTACGC CAGTTGTCGA TATTGTTGGT
TTAGCTAATG GTTATGCTGT GATTGCACTT GATAAAGTCA ATGCTGCAGA AGGCGTGAGT
GATGAGTTAG TTAATGCTCT TAAACAACGC TTGAACGCAC AATATAGTGA AGCTGACTAT
CGTGGTTTGA TTGACTCACT TAAAGCCAAT GCTAAAGTGG TTTACTCAGC AGAGTGA
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| Protein sequence | MLEKIRDGSQ GVIAKSILVL VILSFAFAGV SSYLGSTTDV PAAEVNGDKI TKAELEQAYQ
SERSRMEQQL GEMFAALSAD ERYLESIKQS VLERLVADKL IDQAASTMGL RVSDEQIITA
IKLEPAFQTD GKFDNERYQA ILRQLGYQPQ SFRNMMRVDM TRRQLTAALV GTEFVLPSEA
KQLAELQGQT RDIRYLVVDS APFLANATVT DEQVKNYYDA NQGQFMSPEQ VSLEYVELNA
ADFAKNSPVT DEEAQAYYDE HKTQYLANEK RLAAHILINA DQDDAATKAA DLAKQLDNGA
DFAELAKAHS DDRLSAEQGG KLEWFEPGVM EPTFDAALFA LNKGEHSAVV KTGFGYHIIK
LLDVQAGATV PFADVKAKIV AQLQDKKAVD QFYSLQSKLA DTSYEVPDTL AETAKVLGVS
IKTTPLFSRD DAPEGLNKPD LVKAAFSDTV KLKGLNSEVI ELEPNHVVVI RVKEHHDAGT
LALAEVKANI TERLKQDQAN EAARAKAQEL MTQVKAAATD LGLVSKVKLG RGEQNVDAAI
VGKAFQMPTP SSTPVVDIVG LANGYAVIAL DKVNAAEGVS DELVNALKQR LNAQYSEADY
RGLIDSLKAN AKVVYSAE
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