Gene Sputcn32_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1487 
SymbolcysS 
ID5079639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1695335 
End bp1696720 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content46% 
IMG OID640498616 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_001183011 
Protein GI146292587 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000012906 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATGT TGAAGATTTA CAACAGTATT ACCCGCCAAA AACAGGAATT TAAGCCAATC 
AATCCCGGAA AAATTGGGAT GTACGTGTGT GGTGTGACCA TATACGATCT CTGTCATATT
GGTCACGGCC GTACTTTTGT TTCCTTTGAC ATGATAGTGC GTTACCTGCG CTATGTGGGC
TATGAGGTGA ATTTTCAGCG CAATATTACC GATGTCGATG ACAAAATCAT CAAGCGCGCT
AACGAAAATA ACGAAAGTTG TGAAGCCTTA ACCGAGCGTT TGATTGGCGA GATGCATCGA
GATTTTGATG CCTTAAATAT GCTGCGCCCC GATTTTGAAC CGCGCGCGAC ACTGCACATT
GCAGAAATTA TCGACATGGT TGAGTTATTA CTCGCCCGTG GTCACGCCTA TGTTGCCAGT
GATGGCGATG TGCTCTTTAG CGTGGCATCT TACCCTGATT ACGGCCGTTT ATCGGGGCAA
AATTTAGATC AACTGCAAGC CGGTGCGCGA GTTGAAGTCG ACGAAAACAA GCAAAATCCA
ATGGATTTTG TGTTGTGGAA AATGTCTAAA CCTGGCGAAC CAACGTGGGA ATCCCCATGG
GGACCGGGTC GTCCTGGCTG GCATATCGAA TGTTCAGCCA TGAACAGCAA ACATCTAGGT
CTGCATTTTG ATATTCATGG TGGCGGCTCT GACTTACAGT TCCCACATCA TGAGAATGAA
ATCGCCCAGT CTTGCTGTGC CCATGACACA CCATACGTCA ACTACTGGAT GCACACTGGC
ATGGTAATGG TTGACCGTGA AAAGATGTCT AAGTCCTTAG GCAACTTCTT CACCATTCGC
GATGTACTTG GTCATTATGA TGCTGAAACA GTACGTTACT TCCTATTATC AGGTCATTAT
CGTAGTCAAC TGAACTACTC AGAAGATAAC TTGAAGCAGG CTCGCTCAGC GTTAGAGCGT
TTGTATACGG CCATTAAAGA TGTCGACTTG ACTGTCGCAG CGGCGCCTGC TGAAGAGTTT
ATTGTTAAGT TTAAAGCGGC AATGGACGAT GATTTCAACA CCCCAGAAGC TTATTCAGTG
CTGTTTGATA TGGTGCGTGA CATTAATCGC CTAAAAGCGA CGGATATTGC TAAGGCGTCT
GCCCTTGCTG TGGCAATGAA ACAATTAGCC GATGTACTTG GGCTGTTAGG CCAAGATCCT
GATGCCTTCT TTAAAGGCGA GGGTAGTGAC GATGAAGTGG CTGAAATTGA AGCCTTAATC
GTTGAGCGTA ACCGTGCTCG CAGCGAAAAA GATTGGGCTG CTGCAGATGT GGCGCGTAAT
CGTTTAGATA TTTTGGGCGT TGTGCTTGAA GATGGTCCAA GTGGTACCAC TTGGCGTAAG
AAATAA
 
Protein sequence
MPMLKIYNSI TRQKQEFKPI NPGKIGMYVC GVTIYDLCHI GHGRTFVSFD MIVRYLRYVG 
YEVNFQRNIT DVDDKIIKRA NENNESCEAL TERLIGEMHR DFDALNMLRP DFEPRATLHI
AEIIDMVELL LARGHAYVAS DGDVLFSVAS YPDYGRLSGQ NLDQLQAGAR VEVDENKQNP
MDFVLWKMSK PGEPTWESPW GPGRPGWHIE CSAMNSKHLG LHFDIHGGGS DLQFPHHENE
IAQSCCAHDT PYVNYWMHTG MVMVDREKMS KSLGNFFTIR DVLGHYDAET VRYFLLSGHY
RSQLNYSEDN LKQARSALER LYTAIKDVDL TVAAAPAEEF IVKFKAAMDD DFNTPEAYSV
LFDMVRDINR LKATDIAKAS ALAVAMKQLA DVLGLLGQDP DAFFKGEGSD DEVAEIEALI
VERNRARSEK DWAAADVARN RLDILGVVLE DGPSGTTWRK K