| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1469 |
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| Symbol | |
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| ID | 5079621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1670175 |
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| End bp | 1671824 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640498598 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001182993 |
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| Protein GI | 146292569 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.899491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAA AACTCCCTCG TCAAGCCACG GCATCTGAAG AAAGCCTAAT GCGTATATTT
ACCGTGCCCG AAGATGCAGA ATCGACGCTA AGTATTATCG AGCAGAAGCT TTCCGAGGAT
TTAGCAGGCT TTTTGGGTGA CAGCATTGCC GCGCTCGAAA AACCTTTGTC GGAAATCGAA
ACCGATTTTC AAGCCTTTAA GATCCCAACT CAGCCGCGTT TTGTCTCCGA TTACACCGAT
GAAATTATGC AAAATCTGGT GGCGCATTCG GTACATACCT CTGCGCCAAG TTTTATTGGT
CATATGACAT CGGCCCTGCC TTATTTTGTG TTGCCCCTGT CGAAAATGAT GGTAGGTCTG
AATCAAAATC TGGTCAAAAT CGAAACTTCT AAGGCATTTA CACCGCTTGA GCGCCAAGTG
CTTGGCATGA TGCATCATTT GATTTACGCC CAAAATACGG ATTTTTATCA AAGCTGGATG
CACAGTGCGA ATCATTCCCT CGGGGCTTTT TGTTCGGGCG GTACGGTTGC CAATATCACG
GCGCTGTGGA TTGCCCGTAA CCAATTATTA AAGGCAGATG GTGAGTTTAA AGGTGTTACC
CGCGAAGGGC TACTCAAGGC GCTGCGCTAT TATGGTTATG ATGATTTAGC GATTTTAGTC
TCGGAACGCG GGCATTACTC CCTAGGTAAA GCGGTCGATC TGCTCGGTAT TGGTCGCGAC
AATATCATTA GTATTCCCAC GGATAGCCAC AATAAAGTCG ATATCGCCAA GATGCGCAAA
GCGGCGCTTG AACTTGCCCG TAAAAACATC AAGGTATTGG CAATTGTTGG CGTGGCTGGT
ACAACCGAAA CTGGTAATGT CGACCCGCTG ATTGAGTTAG CTGCGCTGGC AAAAGAGCTA
AATTGCCATT TCCATGTAGA TGCAGCATGG GGAGGTGCGA GTTTATTATC CAATAAATAC
CGCCACTTAC TCGCAGGTAT CGAACTTGCT GATTCGGTGA CTATTGATGC CCATAAGCAG
ATGTATGTGC CTATGGGCGC TGGCATGGTG TTATTTAAAA ACCCCGAGTT TGCCCACGCC
ATTGCCCACC ATGCAGAATA TATTTTGCGC CGTGGTTCAA AGGATTTAGG CAGTCAAACG
CTGGAAGGTT CGCGCCCCGG CATGGCGATG TTAGTGCACG CTTGCTTACA GATCATCGGC
CTCGATGGTT ATGAAATCTT AATCAATAAC AGCATTGAAA AAGCCCGTTA TTTTGCCGAA
CAAATCAAAG CCCATAGGGA TTTTGAGCTA GTCACTGAGC CTGAACTTTG CCTACTAACC
TATCGTTATG TGCCCGCCAA GGTGCAAGCC GCGATGCAAG TGGCGATTGA GCAAGGTGAC
ACTGCAAAAC TTGCACGCTT TAATGAACTG CTCGATGGGC TTACCCAGTT TATTCAAAAG
CACCAGCGCG AACAGGGCAA ATCCTTCGTC TCCCGCACCC GCATCTCCCC CGCCCGCTAT
TTTAGACAAG CGACCGTGGT GTTTCGCGTG GTGTTAGCCA ACCCTCTGAC TAGCCATGAT
ATTCTTAATC AAGTGCTGGT CGAGCAAAGC GAAATCGCCG CATTAGATAA AGAGTTTTTA
CCCGCGCTAT TGGCGATGGT GGCTGAATAG
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| Protein sequence | MTQKLPRQAT ASEESLMRIF TVPEDAESTL SIIEQKLSED LAGFLGDSIA ALEKPLSEIE
TDFQAFKIPT QPRFVSDYTD EIMQNLVAHS VHTSAPSFIG HMTSALPYFV LPLSKMMVGL
NQNLVKIETS KAFTPLERQV LGMMHHLIYA QNTDFYQSWM HSANHSLGAF CSGGTVANIT
ALWIARNQLL KADGEFKGVT REGLLKALRY YGYDDLAILV SERGHYSLGK AVDLLGIGRD
NIISIPTDSH NKVDIAKMRK AALELARKNI KVLAIVGVAG TTETGNVDPL IELAALAKEL
NCHFHVDAAW GGASLLSNKY RHLLAGIELA DSVTIDAHKQ MYVPMGAGMV LFKNPEFAHA
IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG LDGYEILINN SIEKARYFAE
QIKAHRDFEL VTEPELCLLT YRYVPAKVQA AMQVAIEQGD TAKLARFNEL LDGLTQFIQK
HQREQGKSFV SRTRISPARY FRQATVVFRV VLANPLTSHD ILNQVLVEQS EIAALDKEFL
PALLAMVAE
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