Gene Sputcn32_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1458 
Symbol 
ID5079610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1659685 
End bp1659987 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content45% 
IMG OID640498587 
Productbranched-chain amino acid transport 
Protein accessionYP_001182982 
Protein GI146292558 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTGGT TAATGATCTT TTCAATGGCG GCGGTTGTGT TTATCAGTCG TCATTTACTA 
CTTGAGCCTA AACTACCACT GCGATTAAGT AAGGGCACCC AAACCTTTTT AAGTTACTCA
GCCCCAGCGG TACTCACTGC AATCTTTGCA CCCATAGTGT TTGTGCAAGA AGGTCTGCTC
GATCTGAGCC TAGATAACAG CTATCTCATC TGCGCCATAG TCGCTACAGT GTTGGCGCTC
GTCACCCGTA ATACCTTGCT GACCACAGTG CTAAGTATGG GACTATTTTT CTTTATCCAT
TAG
 
Protein sequence
MIWLMIFSMA AVVFISRHLL LEPKLPLRLS KGTQTFLSYS APAVLTAIFA PIVFVQEGLL 
DLSLDNSYLI CAIVATVLAL VTRNTLLTTV LSMGLFFFIH