Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1422 |
Symbol | |
ID | 5079672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1616550 |
End bp | 1617671 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640498551 |
Product | ABC-2 type transporter |
Protein accession | YP_001182946 |
Protein GI | 146292522 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCGTA GAATTTTTGC AATTGTGGTT AAAGAGCTGC GGCAATTGTC TCGGGATCGC ATGACCTTTG GCATGATAGT GATGATCCCT TTGGTGCAAC TGATGCTGTT TGGTTATGCC ATCAATACCG ATGCGCGCCA CTTGCCCGCG GGGCTGGTGA ATTTAAGCGA TTCGGCCTAT AGCCGCACAC TGATACAGGC GGTTGAAGCA ACGCAAGTGG TGGATTTTAA ACAGCGTTAT CTAAGCGCGG CCGAGGCCGA AGCGGCGATC ACTCGCGGTG AAGTTAAAGC TGTACTCTAT TTACCCGCCG ATCTCGATGA GCGTTTAGTG CGTCATCCTA GCTTTGCTGG CCAGCAATAT TTAGCGCAAC CCGTCGGTCA ATGGCTGGTG GATGGCTCGG ATACCGTAGT CGCCTCAACC ATTCGCAGCT TAAGGCAAAT GCCGCTGGAT GAAATCGCAG GTCGGGCGCT AAAAACTGCT ACGCCGAGTT TTGAAGTAGT GCAATATTTC AACCCTGAAC AGCGCTCTGT GGTCAACATA GTGCCCGGCC TGTTGGGGGT GATTTTGACT ATGACCATGG TGATGTTCAC TTCCGCCGCC ATAGTGCGCG AGCGCGAGCA GGGCAATATG GAATTTTTGA TCACCACACC GGTTAGGCCA CTGGAGTTGA TGCTCGGTAA AATTGTGCCC TATGTGTTGG TGGGTTTTGT GCAAGTGACG ATTATTTTGA GTGCTGGGCA TCTGCTATTT GACGTACCTA TTCGCGGTGG GCTCGATTCC ATTGCCCTTG CCGCCATGTT GTTTATTTGT GCCAGTTTAA CCTTAGGTTT AGTGATCTCG ACGATGGCGA AAACCCAACT GCAGTCGATG CAGATGACGG TATTCGTGTT GTTACCTTCT ATTCTGTTAT CTGGCTTTAT GTTTCCCTTT GATGCTATGC CCATCGCCGC GCAGTGGATT GCCGAAGCCT TACCCGCAAC GCACTTTATG CGTATGTCTC GGGCGATAGT GCTGCGGGAT GCGCAAGTCA TGGATCTGCA ATTTGATGCC TTGTGGATGA TAGGTTTTAC CTGTATTGGG TTGCTTATTG CGAGTTTGCG ATTCTCGAAA CGCTTGGATT AG
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Protein sequence | MWRRIFAIVV KELRQLSRDR MTFGMIVMIP LVQLMLFGYA INTDARHLPA GLVNLSDSAY SRTLIQAVEA TQVVDFKQRY LSAAEAEAAI TRGEVKAVLY LPADLDERLV RHPSFAGQQY LAQPVGQWLV DGSDTVVAST IRSLRQMPLD EIAGRALKTA TPSFEVVQYF NPEQRSVVNI VPGLLGVILT MTMVMFTSAA IVREREQGNM EFLITTPVRP LELMLGKIVP YVLVGFVQVT IILSAGHLLF DVPIRGGLDS IALAAMLFIC ASLTLGLVIS TMAKTQLQSM QMTVFVLLPS ILLSGFMFPF DAMPIAAQWI AEALPATHFM RMSRAIVLRD AQVMDLQFDA LWMIGFTCIG LLIASLRFSK RLD
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