Gene Sputcn32_1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1419 
Symbol 
ID5079669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1613914 
End bp1614612 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content47% 
IMG OID640498548 
ProductTetR family transcriptional regulator 
Protein accessionYP_001182943 
Protein GI146292519 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTCG TCCCCGGTCG TCCAAAGGGG CTGGTCCCTT TTACCGTCCA ACCCACATCA 
CAGCCGTTTA TTCCCAGTCG ACCAAAGGGG AGTTCTGACG CTCGCCAACG CTTAATTATC 
GCCGCCTTAA GTCTTTTTAG TCACCGCAGT TATCCAACGG TATCGACCCG TGAAATTGCT 
CGCGAAGCTG GCGTCGATGC TGCGCTTATC CGTTACTATT TTGGCTCAAA AGCAGGACTG 
TTCGAACAAA TGGTGCGTGA AACCCTTGAG CCAGTATTAG CGCGTTTACG CGAAATATCT 
GCAGCTCAAG CGCCTAATAA TATGAGTGAA CTTATGCAAA CCTATTATCG TGTTATGGCG 
CCAAATCCTG GACTACCAAG GTTGATTATG CGGGTATTGC AAGAGGGGGA TGGTACGGAG 
CCCTACCATA TTATGTTGTC TGTGTTTGAT CATATTTTAT CCCTTTCTCG GCAATGGCTC 
GAATCCACAT TAGTCAATGC GGGATACTTA AAAGAGGGGA TTGATCCTGA TTTAGTCCGT 
TTAAGTTTTG TGAGTCTGAT GGTGTTTCCA CTTATTGCAC CACCTGTGTT GATGCGACAG 
TTTGGTTTTA GTGTCGATGC CGATGATTTA CAGCGCTTAG CATCGCATAA TATGCAGGTT 
TTTACTCAGG GTGTGCTGCG CGAACCGAGG AATGTGTGA
 
Protein sequence
MSLVPGRPKG LVPFTVQPTS QPFIPSRPKG SSDARQRLII AALSLFSHRS YPTVSTREIA 
REAGVDAALI RYYFGSKAGL FEQMVRETLE PVLARLREIS AAQAPNNMSE LMQTYYRVMA 
PNPGLPRLIM RVLQEGDGTE PYHIMLSVFD HILSLSRQWL ESTLVNAGYL KEGIDPDLVR 
LSFVSLMVFP LIAPPVLMRQ FGFSVDADDL QRLASHNMQV FTQGVLREPR NV