| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1412 |
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| Symbol | |
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| ID | 5079662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1604514 |
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| End bp | 1605533 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498542 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001182937 |
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| Protein GI | 146292513 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACT CACCGAAACT GGTACGCCAA CAATCCGCTT TATCCATTGT CGATGATGCT
GCATTGCCTG CAACTAAGCA TGTTAAGGGG ACTGAGTTAC CGCTGAACTT TTTCGAGCAT
TCTTCCCTCC AGACCATTGA ACTCTTTATT CAACATTTAA CCGAGGTCGT TATCTTGGTT
AATGCCAACG GCTTTATCCG ATCTTGCAAT CAGCGTAGTG CCGATCTATT GGATTGTCCT
CAGGCCACGT TAACGGGACA AGATTGGCGC AACTTTTTGA CCGAACACCA TCAAGCTCGC
TATAACAACC TGCTGAGCAA CGATATTAAA TTAGGTAAAA ACTGTGGTAT TCCAGTAGAG
CACTCCGCAG AGGAAATCAC CTTAATCACG GCCTCTGGCA AGGCAAAAGA GGTCGAACTG
TCAATCTCCT ATATTCCGAG CCATGAGCCA TTGTTCGTGA TGGTGATGCA TGATTTAACC
CAACATAAAG AAGAAAACCA GAAGCTACGT AAGTTGGCTG CTACTGACTC ACTAACGGGA
CTTGCGAACC GCCGCTACTT TGATGAAATA CTGCAACACT ATTGGGAAGA ATGCACCGCT
AAGCTGCGCC CTCTTAGCGT GGTGATTATT GATGTGGATT ACTTTAAGGT GTTTAACGAT
CAGTTTGGTC ATATCCAAGG TGATGAATGC CTTAGAAAAA TTGCCAAAGT TATCGCAGAC
ATAGTACCTC TCGACATTGG ACTTGCTGCC CGTTACGGCG GCGAAGAGTT TGCGCTGATC
CTACCCAATC ATAATGCCAA AATGGCACTC ACCATTGCCC AGAAAATACA GCAAGGGATT
AATGCCCTAC GTTTTACCGA GCAAGGCCTA CGTGACTATG TCTCTGTCAG TGCAAGCCAA
GGTATTGCCA GTGAGGTCAA TGGACAGTTT CGTACCTCAA TGGCAATGCT CTGCGCCGCC
GATACCGCGC TGTACCGTGC AAAGGCCGAT GGTCGCGACC GAATTAATAC ATCACTTTAA
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| Protein sequence | MTNSPKLVRQ QSALSIVDDA ALPATKHVKG TELPLNFFEH SSLQTIELFI QHLTEVVILV
NANGFIRSCN QRSADLLDCP QATLTGQDWR NFLTEHHQAR YNNLLSNDIK LGKNCGIPVE
HSAEEITLIT ASGKAKEVEL SISYIPSHEP LFVMVMHDLT QHKEENQKLR KLAATDSLTG
LANRRYFDEI LQHYWEECTA KLRPLSVVII DVDYFKVFND QFGHIQGDEC LRKIAKVIAD
IVPLDIGLAA RYGGEEFALI LPNHNAKMAL TIAQKIQQGI NALRFTEQGL RDYVSVSASQ
GIASEVNGQF RTSMAMLCAA DTALYRAKAD GRDRINTSL
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