| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1409 |
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| Symbol | |
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| ID | 5079659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1599281 |
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| End bp | 1600921 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498539 |
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| Product | ABC transporter related |
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| Protein accession | YP_001182934 |
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| Protein GI | 146292510 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0180506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATTGCC AAAAATCTAA CCAACATTAC TCGATTTGGA AGTTCATTTT GATCACAACA
GCGAATATCA CCATGCAGTT TGGCGCTAAG CCACTGTTTG AAAACATCTC AGTTAAATTT
GGCGGCGGTA ACCGTTACGG TCTTATCGGT GCGAACGGCT GTGGTAAATC AACCTTCATG
AAGATCCTTT GCGGTGATCT AGAGCCAAGC AGCGGCAACG TGTCTTTGGA TGTGAATGAG
CGTCTGGGTA AGTTGAGCCA GAACCAATTC GGTTATGAGG AATACACGCT TATCGATACA
GTGATCATGG GGCACAGTGA GCTGTGGAAG GTAAAGCAAG AGCGTGATCG AATTTATTCT
TTACCCGAAA TGAGTGAAGA AGACGGCATT GCCGTGGCAA ACCTTGAGAT GGAATTTGCC
GAAATGGACG GTTACACCGC CGAATCTCGC GCGGGTGAAT TGTTGTTAGG TGTGGGTATT
GGCATTGAAA CCCATTTTGG TTTGATGTCT GAAATTGCTC CGGGCTTAAA ACTGCGGGTG
TTGTTAGCCC AAGCCCTGTT CTCCGATCCT GATGTACTGC TGCTTGACGA ACCCACCAAC
AACTTGGACA TCGATACCAT TCGCTGGTTA CAGGACGTAT TGAACCAACG CGATAGCACC
ATGATCATTA TTTCCCACGA CCGTTACTTT TTAAACTCAG TCTGTACCCA TATGGCGGAC
TTAGACTACG GTGAACTGCG CGTTTACCCT GGTAACTACG ACGAATATAT GCAAGCGGCT
ACCCAAGCCC GTGAGCGTTT AATTGCGGAT AATGCGAAGA AAAAAGCCCA AATTTCTGAG
CTGCAAACCT TCGTTGCACG TTTCTCTGCC AACGCTTCTA AGGCAAAACA AGCGACGTCC
CGCGCCCGTC AAATCGACAA AATTAAGCTA GATGAAGTCA AAGCCTCTAG CCGCGTGAAC
CCCTTTATTC GTTTCGAGCA AGAAAAGAAA CTGTTCCGCA ATGCCTTAGT GGTTGAAAAC
TTAACTAAAG GTTATGACAC ACCGCTATTT AAAGACTTGA ACTTAATCGT TGAAGTGGGC
GAGCGTATCG CGATTTTAGG TGAGAACGGT GTCGGTAAAA CGACATTGTT ACGAACGCTT
ATCCATGATA TTCCGCAGGA TGAAGGTCAT ATTCAATGGT CTGAAAACGC CAACATTGGC
TACTATGCGC AGGATCATGA GTCTGATTTT GCTAATGATA TGACCTTATT TGAATGGATG
AGTCAGTGGC GTAAACCTGA AGACGATGAC CAATCGGTAC GTGGTATTTT AGGCCGTATG
TTGTTTGGTT CTGACGACAT TAAAAAGTCA GTCAAAGTGC TGTCGGGTGG TGAGAAGGGC
CGGATGTTAT TTGGCAAGCT CATTATGCAA AAAGCCAATA TTTTGATGCT CGACGAACCG
ACCAACCATA TGGATATGGA ATCGATTGAG TCATTAAACA ACGCCTTAGA AAAGTACGAA
GGCACTTTGT TGTTTGTGAG TCACGATCGT GCATTTGTAT CATCATTGGC TAACCGTATT
ATTGAAATCA CTTCTAAAGG CGTGAATGAT TTCAAAGGCA CCTATGATGA GTTCCTTGCG
AGCAAAGGTA TTGAAGGCTA A
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| Protein sequence | MHCQKSNQHY SIWKFILITT ANITMQFGAK PLFENISVKF GGGNRYGLIG ANGCGKSTFM
KILCGDLEPS SGNVSLDVNE RLGKLSQNQF GYEEYTLIDT VIMGHSELWK VKQERDRIYS
LPEMSEEDGI AVANLEMEFA EMDGYTAESR AGELLLGVGI GIETHFGLMS EIAPGLKLRV
LLAQALFSDP DVLLLDEPTN NLDIDTIRWL QDVLNQRDST MIIISHDRYF LNSVCTHMAD
LDYGELRVYP GNYDEYMQAA TQARERLIAD NAKKKAQISE LQTFVARFSA NASKAKQATS
RARQIDKIKL DEVKASSRVN PFIRFEQEKK LFRNALVVEN LTKGYDTPLF KDLNLIVEVG
ERIAILGENG VGKTTLLRTL IHDIPQDEGH IQWSENANIG YYAQDHESDF ANDMTLFEWM
SQWRKPEDDD QSVRGILGRM LFGSDDIKKS VKVLSGGEKG RMLFGKLIMQ KANILMLDEP
TNHMDMESIE SLNNALEKYE GTLLFVSHDR AFVSSLANRI IEITSKGVND FKGTYDEFLA
SKGIEG
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