Gene Sputcn32_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1389 
Symbol 
ID5080584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1577543 
End bp1578529 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content46% 
IMG OID640498520 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001182915 
Protein GI146292491 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.300379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTG CTAGTTATAA CAATGGTCGC CGCGATGGTC AGTTGATGTT AGTCAGCCGC 
GATCTCACTA AAACGGTTGC CGTACCTGCC ATTGCCCATA CTATGCAGCA ATTACTCGAT 
GGTTGGGATT TACTGAGACC ACAATTGCAA GAATTGTACG ATGCGTTAAA TGAAGGCATG 
TTAGATAACG CTCAAGCGTT TGATGAGGCC AAGTGTTTAT CACCATTACC ACGAGCATAC 
CAATGGGCCG ATGGTAGCGC CTATGTGAAT CATGTTGAGC TAGTCCGTAA AGCCCGTGGC 
GCAGAAATGC CAGAAACCTT CTGGACCGAT CCACTGTTTT ATCAGGGCGG CTCGGACAGT 
TTTATTGCCC CTAAAGCGGA TATCCCATTG GCGAGTGAGG ATTGGGGCAT CGACTTTGAG 
TCTGAAATTG CGGTTATTAC CGATGATGTG CCTATGGGGG TGAGTACTGA CAATGCAGCT 
AAGCACATTA AATTGTTGAT GTTAGTTAAC GATGTGTCAT TGCGTAACTT GATCCCGGGT 
GAACTGGCGA AAGGCTTTGG TTTCTTCCAA TCTAAACCAT CGAGCAGTTT TTCGCCTGTG 
GCTGTGACAC CGGATGAATT GGGTGTCCGT TGGGAAGATT CGAAAGTGCA TTTACCGTTG 
ATCACCTCTT TAAATGGTGA ATTATTTGGT CGTCCGAATG CAGGCGTTGA TATGACCTTT 
AATTTTAGCC AATTAATTGC CCATGTTGCC AAAACTCGCC CATTAGGAGC AGGTGCTATT 
ATTGGCTCAG GTACGATTTC TAATTATGAC CGCAGCGCAG GCTCAAGCTG TTTAGCGGAA 
AAACGTATGT TAGAAGTGAT TGCTGAAGGC AAAGCCACTA CGCCATTTAT GCGTTTTGGC 
GACACTGTGC GCATCGAAAT GCTCGATGAT AACGGAGTGT CGATTTTCGG TTCAATCGAT 
CAAAAAGTAG TTGAATACAA AGCGTAG
 
Protein sequence
MKLASYNNGR RDGQLMLVSR DLTKTVAVPA IAHTMQQLLD GWDLLRPQLQ ELYDALNEGM 
LDNAQAFDEA KCLSPLPRAY QWADGSAYVN HVELVRKARG AEMPETFWTD PLFYQGGSDS 
FIAPKADIPL ASEDWGIDFE SEIAVITDDV PMGVSTDNAA KHIKLLMLVN DVSLRNLIPG 
ELAKGFGFFQ SKPSSSFSPV AVTPDELGVR WEDSKVHLPL ITSLNGELFG RPNAGVDMTF 
NFSQLIAHVA KTRPLGAGAI IGSGTISNYD RSAGSSCLAE KRMLEVIAEG KATTPFMRFG 
DTVRIEMLDD NGVSIFGSID QKVVEYKA