Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1382 |
Symbol | |
ID | 5080577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1570820 |
End bp | 1571233 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640498513 |
Product | hypothetical protein |
Protein accession | YP_001182908 |
Protein GI | 146292484 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGGGA AAAAATCCTT TTTTACCCCT AAGCCAAAAC TTGCGCTCAG TTTTATTGCA AACGGCACTA AACTCACTGG CAATATTGAG TTTTCAGGTG ATGTGCTCAT TGGTGGTGAA ATCTGTGGTC AAATACTGTC AAATGCCAAT ATCACCATAG AACAAGGGGG AAATGTCCAA GGGGAAATTA AATGCCAAGA ATTTATGGTC AATGGATACT TTAAAGGCCG TTTGATCTGT GAGCGTTTAG TGATCCAACG TAATGGCATA GTCGATGGAG AAGTCGCCAG TACATCCATG CAAATTATGG AGGGTGGGCA ATTTATCGGA TTAAGGATCA AAGAAGATAC GTCGACAATT CGAACACATA CTCTCCCTTC CCCGCAAGAA ACGCTTATTT GCCACAAAAA TTAA
|
Protein sequence | MFGKKSFFTP KPKLALSFIA NGTKLTGNIE FSGDVLIGGE ICGQILSNAN ITIEQGGNVQ GEIKCQEFMV NGYFKGRLIC ERLVIQRNGI VDGEVASTSM QIMEGGQFIG LRIKEDTSTI RTHTLPSPQE TLICHKN
|
| |