Gene Sputcn32_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1372 
Symbol 
ID5080567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1559564 
End bp1560259 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content45% 
IMG OID640498504 
Producthypothetical protein 
Protein accessionYP_001182899 
Protein GI146292475 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.651893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATTC CCTTTATCCT GCTGTTATTG CTTGTTTCTT TATTTATTTG GCGCCGTACT 
ATGGCGAAAT ATTTAGTGGC GAGTGCTTTT ATCCTTTTGC TCTTTTTAAG TAGCCAACTA 
AGCGTAAGCA CACTTGTTCG CCCGCTAGAA TCAATCTATC CCATTAATTC CACGCCCATT 
AGCGGTCAAT GCTTTGTGAT GGTGTTAGGC TCTTCTCACT CAGATATTCA AGCAGCAACC 
GCAGTACAGT CCTTATCGGC AGTTGCGTTA GCCAGACTAT CAGAGGGGAT TCGTCAGCTA 
GGGCTTGGTC AGGATTGTAT TTTGATTGTC AGTGGCTGGG GAGGAGAACT TACCCAAATT 
TCCCATGCAG AAATGATGGC GAAGGCTGCA GTGGAGTTAG GGGTTGATAA AAGTAAAATT 
ATTCAATTTC CGCTAGCGAG AGATACCCTA GAAGAAGCGC AATATCTCAA GTGGGAACTT 
GGAGATTCAT CTTTTCGTTT GGTCACATCG GCATCTCATA TGCCAAGGGC TATGGCTATT 
TTCACTGGGA AAGGCTTATT GGCCAGTGCT GCTCCTACGG ATTTTAGGGC GCGAGATGAT 
TTTTGGTGGC GACTGACTGC CGATAATCTC GTGTCATCCC AGCGGGCCAT CCACGAATAT 
ATTGGCCGTT TATGGCTTTG GATAAAACAG GAATAA
 
Protein sequence
MPIPFILLLL LVSLFIWRRT MAKYLVASAF ILLLFLSSQL SVSTLVRPLE SIYPINSTPI 
SGQCFVMVLG SSHSDIQAAT AVQSLSAVAL ARLSEGIRQL GLGQDCILIV SGWGGELTQI 
SHAEMMAKAA VELGVDKSKI IQFPLARDTL EEAQYLKWEL GDSSFRLVTS ASHMPRAMAI 
FTGKGLLASA APTDFRARDD FWWRLTADNL VSSQRAIHEY IGRLWLWIKQ E