| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1368 |
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| Symbol | |
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| ID | 5080563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1553486 |
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| End bp | 1556707 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498500 |
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| Product | SNF2-related protein |
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| Protein accession | YP_001182895 |
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| Protein GI | 146292471 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGTT TATCCCCCCA AGAGCCAATT CAATTGACTC AAGCCTCCGT TGAGTCATTA
TTCACGCCGC CGACGTTAAT GCGAGCCCGT GATTATGTGA TGAAAGGGCG GGTATTAAAC
GTAAAAGCAA ACGCTGATTT TCGCCATATT GAAGGTTTGG TCAGCGGTAC TGAACGTGCT
CCTTATCGAC AAGATATCCG TCTTGTTAGC GTTAACCATA AGCTGATCAT GAACGGTTTT
TGTTCCTGTC CTGCAACGGG GCATTGCAAA CATATTGCCG CCGTACTTTA CAGTTTGCTC
AGTGATAAAA CGGTAGAAGA TCAACGTATT ACCCAATGGC TACATTTACT GGATGAAGCC
GATGATCTTA AACTTTATGA CGTTGATACG CTTTATGAAG ATCGTGTGCT CTATGTGCTT
TCGAAGGATG ATAATGGTGT ATTTGTTGAA TTTCGCCGAG GCAAATTGGC TAAGAAAGGC
GGGTACAACA AAGGGTCAAA GGTTGCGCTA TCCGATGTGC AATATTTTAT GCCCGCTTGG
ATCGGTTCTG ATGATGTGCT TATTCTTAAC TTGGTTATGT CGACCCGTCG CCACGGTGCT
TCACGTCTCT ATTTAAAAGC GCAGTTAGGT GCGGTCGCGT TAGAGAGAAT GCTTGCGACC
GAACGTTGTT TTTGGGAGGA AAGCCGTATT CCTCTGAGTC AAGGGGAGGC GGTAAGTCCT
GTTTTTGTCT GGAGTGATAT TGATAGTGAG CATAAACAAA TACAGTTGGT GTTGCCCAAT
AAGGACAATT GGGAGCTGAT CTCCACCGCG CCACCTGCTT ATATTGAGTT GGATTACTTT
AAGGTAGGAG CTGTAAAAAC AGACATTAGT ATCGATAAGT TAATGTTGTT AAATCACATG
CCTCCGGTGC CAAGTTCACA GATAGAAACG GTGAGTCATA AGCTGATAAA ACATTTCTCC
GCCAAAGTAG TTCCCACACC TCTTCCGATT GATTTTGTAG AACTTCAGGC ACCTTTGCAG
ATAAGGTTAA CGCTAACGTC ACTGGACTTA CCAGAGCATG CGATGGCTCA ACCATTCGTA
TTACTGGAAT ATGTTTATCA AGATGTGGTG CTTGGGGGGC GTTATATTGA TGAGCCGCTA
TCTTTAGTCA CTCAGGGAGG CAAAACATAC CAAGTCATGC GGCAGGTCGC GTTGGAAAAA
GACGCGATTA CTCGTTTGAT GGCGTTAGAA TTTGCTGAAC TTGATCCCTC ATTTTTCCCT
AATAGCAATA GCCTAAGTAG TATTTGGAGT TTAGGGCCTT TACCTGAAGC CATTAAAAAG
TGGTTAAGGT TTATTGAGCT CTGTATTCCG GCCTTAGAGG ACTTGGGGTA TCAAGTCTGT
TATGCCGAAA ACTTTAGCTT AAATGTGATT GATACTCCTC TTGCTATTGA GCTTGATGAC
TCAGAGGAAG GCTGGTTTTC CCTATCTCTC AATGCGGATA TTGATGGCCA AAGTATTCCT
ATGTTGCCCC TCATTGCCAC TTGGCTTAAA CAGCATGGGG AACCTGCGGA TGATGCTGAA
TTATTACTCC CAAGCCCAAA TGGTGATTGG TTAAAAGTCA AAGCCAGTGT GATTAAACCA
TTGGTGAGCA TTATTTTAGA ACTATTTGAG AGTCACAAAG GCCACAGTGT TGCGTTACCA
AAGTATCGAG CCCATTTGCT GAATGATTTT GTCGAGAGTG AAATACGTTT ATTAAATGGT
GAGCGGGTGA GAAGTCTGGC GGCAAAATTG GATCAATTTC AGGGTGTAGT TGAGGTGGAT
TTACCTCAGC AATTACAAGC TGAATTACGA CATTATCAAC ATCAAGGTTT AAATTGGCTC
TGTTTTTTAA AGGAATATCA GCTTGGTGGC ATTTTGGCCG ATGATATGGG ACTCGGTAAA
ACGATTCAAA CATTGGCCTT TTTACTCAAG CAGCAAGCGC TTAAGTCCAC GGGAGCGAGT
TCCTCACCAA GTTTAATCAT TTGTCCCACG AGTTTAGTGG GTAACTGGGC CAAAGAGGCG
ACTAAGTTTG CCCCTTCATT AAAGCTGGTG GTGATCCATG GTGCAGCCCG TAAACCCTTG
CTTGAGTGCT TAAATGAATT TGATGTTGTT GTAACGACCT ATCCGTTAAT GATGCGTGAT
AGCGAATATT ATCAGCCGCA TATATTTGAA CATATTGTCT TAGATGAAGC CCAGCAGATT
AAAAATGCCC AAGCAAAAGT GACTCAAATA ATTAAAGAGT TACGCTCCCC ATTCAAGTTA
TGTTTAACAG GAACGCCACT GGAAAATCAC TTAGGTGAGC TTAAGTCTTT GATGGATTTT
TGTTTGCCAG GGCTTTTAGG GACAAATGCC TTTTTTAACA AATCCTTTAG ACATAGTATC
GAGCGTTATG GCGATACAGA TAAAGCAAGG GCATTGAGCC AGCGTATTGC TCCTTTTGTG
CTGCGTAGAA CAAAAGATGA AGTCGTCAGT GAATTACCGG CGAAAACCGA AATCGCTCAA
ATCTTAGAAC TTGAGAAAGA TCAGCGTAAT CTCTATGAGA GTATTCGCTT AGTCATGGAG
AAAAAACTGC GGGATCTATT TGCAAACCAA GGTGTTAACA GTAGCCATAT TGAATTTTTA
GATGCGCTGT TAAAGCTACG TCAGGCCTGC TGTGATCCGC GTTTAGTCAA GTTAGAGCAA
GCACAAAAAG TAAAGAATAA TGCTAAGCTG GATTGGCTTA AGCAAAACTT GCCTGAGATG
GTGCAAGAAG GCCGTAAGGT ATTGATATTC AGCCAGTTCA CTAGCATGCT GACCTTGATT
GAAGCAGAGC TGCAATCGTT AAATATTGAT TACAGTAAAC TGACAGGACA AACCCGTTGG
CGTCAAGCGC AAATTGATCG ATTTCAAGAC GGTGATACAC CTGTGTTTTT AATCAGTTTA
AAGGCCGGGG GAACAGGGCT AAATCTCACG GCTGCCGATA CCGTTATTCA TTACGACCCT
TGGTGGAACC CTGCCGCAGA AAAGCAAGCC ACAGATAGGG CACATCGTAT TGGTCAAGAT
AAGCCAGTAT TTGTGTATAA ATTAATTGCT GAAGGTACTG TTGAGGAAAA AATCCAAGAA
ATGCAGCAAC ATAAGCAAAA TTTGGCCGAC AGTATTCTTG AAGGGAAAGG CAAAGGGGCA
TGGCAGGGTA GTGCCGATGA ACTGTTATCG CTTTTTAGCT AA
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| Protein sequence | MNRLSPQEPI QLTQASVESL FTPPTLMRAR DYVMKGRVLN VKANADFRHI EGLVSGTERA
PYRQDIRLVS VNHKLIMNGF CSCPATGHCK HIAAVLYSLL SDKTVEDQRI TQWLHLLDEA
DDLKLYDVDT LYEDRVLYVL SKDDNGVFVE FRRGKLAKKG GYNKGSKVAL SDVQYFMPAW
IGSDDVLILN LVMSTRRHGA SRLYLKAQLG AVALERMLAT ERCFWEESRI PLSQGEAVSP
VFVWSDIDSE HKQIQLVLPN KDNWELISTA PPAYIELDYF KVGAVKTDIS IDKLMLLNHM
PPVPSSQIET VSHKLIKHFS AKVVPTPLPI DFVELQAPLQ IRLTLTSLDL PEHAMAQPFV
LLEYVYQDVV LGGRYIDEPL SLVTQGGKTY QVMRQVALEK DAITRLMALE FAELDPSFFP
NSNSLSSIWS LGPLPEAIKK WLRFIELCIP ALEDLGYQVC YAENFSLNVI DTPLAIELDD
SEEGWFSLSL NADIDGQSIP MLPLIATWLK QHGEPADDAE LLLPSPNGDW LKVKASVIKP
LVSIILELFE SHKGHSVALP KYRAHLLNDF VESEIRLLNG ERVRSLAAKL DQFQGVVEVD
LPQQLQAELR HYQHQGLNWL CFLKEYQLGG ILADDMGLGK TIQTLAFLLK QQALKSTGAS
SSPSLIICPT SLVGNWAKEA TKFAPSLKLV VIHGAARKPL LECLNEFDVV VTTYPLMMRD
SEYYQPHIFE HIVLDEAQQI KNAQAKVTQI IKELRSPFKL CLTGTPLENH LGELKSLMDF
CLPGLLGTNA FFNKSFRHSI ERYGDTDKAR ALSQRIAPFV LRRTKDEVVS ELPAKTEIAQ
ILELEKDQRN LYESIRLVME KKLRDLFANQ GVNSSHIEFL DALLKLRQAC CDPRLVKLEQ
AQKVKNNAKL DWLKQNLPEM VQEGRKVLIF SQFTSMLTLI EAELQSLNID YSKLTGQTRW
RQAQIDRFQD GDTPVFLISL KAGGTGLNLT AADTVIHYDP WWNPAAEKQA TDRAHRIGQD
KPVFVYKLIA EGTVEEKIQE MQQHKQNLAD SILEGKGKGA WQGSADELLS LFS
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