| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1363 |
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| Symbol | dnaE |
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| ID | 5080558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1544202 |
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| End bp | 1547675 |
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| Gene Length | 3474 bp |
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| Protein Length | 1157 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640498495 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001182890 |
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| Protein GI | 146292466 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATC CTCGTTTTGT GCATCTTCGT GTCCACAGTG ACTTTTCTAT GTCCGATGGC
GTAGCCAAAG TTAAACCTAT TCTTGCCCAA GTTGAGGCGT TAGGTATGGC TGCGGTCGCC
TTGACGGATC AAAACAACTT CTGTGGATTA GTAAAGTTTT ACAGTGGCTG CCATGGTGCG
GGGATTAAGC CCATTATTGG TGCCGATTTT TGGATGCAAG TGCCTGGGTT TGAAGGTGAA
TTCTGTGCGT TAACCATTAT CGCAATGAAC AACGTGGGTT ATCAAAATCT CACTCAAATT
ATCAGCCAAG CCTATTTGCG GGGGCAGGTG GCGGGTCGAG TGGTGATCGA TCAAGAGTGG
TTACTGACCT ATAACGAAGG CATATTATTG CTTTCTGGCG CTAAGGAAGG TGATATTGGT
AAGGCGTTAC TTAAGGGGAA TAATACTCAA GTTGAATCCC TTTGTGAGTT TTATCAAACC
CATTTCGCTG AACGCTACTT TTTAGAGCTA ATCCGCACGG GTCGACCCGA TGAAGAGCGT
TATTTGCATA TGGCCGTTGT GTTGGCGCAG GAAAAAGGCT TCCCGGTTGT GGCCACCAAT
CAGGTCGTGT TTTTAAAACC CGAAGATTTC GACGCCCACG AAATTCGCGT GGCTATCCAT
GATGGCTTTA CTCTTGCGGA TCCCCGCCGT CCTAAAAAGT ACAGTGAGCA GCAATACTTA
CGTAGTGAAG AGGAAATGTG CGAGCTATTT GCTGACATTC CTGCCGCACT TTCTAATACG
GTTGAAATCG CTAAACGCTG TAATGTGACA ATTCGTTTAT ACGAGTATTT TCTGCCTAAC
TTCCCTACGG GCGATATGTC CATCGAAGAC TTTTTGGTGG ATTGTTCGAA GAAGGGTCTC
GAGGAGCGCC TCGCGTTTTT ATTTCCCGAT CCACAGGTTC GTGCCGAGCG CCGCGGCGAA
TACGATGAGC GCCTAGATAT CGAATTGCAA GTGATCAACC AAATGGGTTT CCCCGGTTAC
TTCTTGATCG TGATGGAGTT TATCCAATGG GGTAAGGATA ATGGGATTCC TGTAGGGCCG
GGCCGTGGGT CGGGTGCGGG TTCGCTTGTT GCCTATGCTC TTAAAATTAC TGACTTAGAT
CCGCTTGAAT TTGACTTGCT GTTCGAACGA TTCCTCAACC CCGAGCGGGT TTCTATGCCC
GACTTTGACG TCGACTTCTG TATGGATAGA CGGGACGAGG TGATAGACCA TGTGGCCGAG
TTATACGGCC GTGAAGCGGT GTCGCAAATC ATCACCTTCG GTACTATGGC CGCAAAAGCG
GTTATTCGCG ACGTTGGCCG CGTACTAGGT CATCCCTATG GTTTTGTTGA CCGTATTTCA
AAACTTATTC CCCCTGAGCC TGGAATGACA CTGGCTAAAG CCTTTGAGGT CGAACCTGCG
CTGCAGGAGT CCTACGACGC CGATGAAGAT GTTAAAGATC TTATCGACAT GTGTCGTAAA
CTTGAGGGCG TGACTCGTAA CGCAGGTAAG CATGCGGGTG GGGTGGTAAT TGCACCCACT
AAAATTACCG ATTTTGCACC ACTTTATTGT GATGCAGAGG GTAAAAACCC AGTAACACAA
TTCGATAAAA ACGATGTGGA AACCGCAGGC CTTGTGAAGT TTGACTTCTT GGGGCTACGT
ACCCTCACGA TTGTCGATTG GGCGCTGGAG ATGATCAACA AAGTGGAGGT CAAAAATGGC
CGCCCTCCTG TACGTATCGA GGCAATTCCT TTAGACGATC CTGCCTCGTT TCGATTATTA
CAGCGTTATG AAACCACCGC TGTTTTTCAG CTTGAATCCC GCGGTATGAA GGATTTGATT
AAGCGACTTC AACCGGATTG CTTCGAGGAT ATGATCGCGC TTGTCGCCCT GTTCCGTCCT
GGGCCTTTGC AATCGGGCAT GGTGGATAAC TTTATCGAGC GTAAGCATGG CCGCGAGGAA
GTGTCTTACC CAGATTCCCA ATACCAGCAC GAATCCTTAA AGGAATTACT CTCACCTACC
TATGGCATTA TCTTGTATCA AGAGCAGGTC ATGCAGATAG CGCAGGTGCT TTCTGGCTAC
ACTCTAGGCG GCGCCGATAT GCTTCGCCGT GCCATGGGTA AGAAAAAACC TGAAGAGATG
GCTAAACAGC GTAGCATCTT TAAAGAGGGT GCGATTAAAA ATGGCGTCGA CGGTGAGTTG
TCGATGAAAA TCTTCGACTT AGTGGAAAAG TTCGCCGGTT ATGGTTTTAA CAAATCCCAC
TCCGCCGCTT ATGCCTTGGT TTCCTATCAA ACCTTGTGGT TGAAAACCCA TTACCCTTCA
CAGTTTATGG CGGCGGTGAT GTCCGCGGAT ATGGATAACA CCGACAAGAT AGTGACACTG
GTTGATGAGT GCGAACGCAT GGGGCTCACT CTGATCCCGC CCGATGTGAA CAAAGGGCTA
TTTAAATTTA CTGTCGATGA TGATCTGCGA ATTGTTTATG GTATCGGTGC CATTAAAGGT
GTGGGTGAGG GCCCTGTTGA GTCGATTTTA GAGGCGCGTA AAGATGGCCC CTTTGTTGAT
TTATTCGATT TCTGTGCCCG TATCGACCTG AAAAAACTCA ATAAACGTGT GATTGAAAAG
CTTATCTGCG CGGGTGCCTT AGATTCCCTC GGACCGCATC GCGCTTCGAT GATGGCGACC
TTACCCGAAG CGATGCGCGC CGCCGATCAA CATGCCAAAG CGCAGGCAAT CGGTCAGCAC
GATATGTTTG GCCTGCTCAA TAGCGAGCCG GAAGATAGCA AACAACAGTT TGTGGAATGT
ACCCCATGGC CAGATAAAAT TTGGCTTGAG GGAGAGCGTG AAACTTTAGG GTTATATTTA
ACAGGTCACC CTATTAATCA ATATCTTAAA GAACTTAAGT ACTATACTTC AGGGCGCTTA
AAAGATGTGC ATCCTACTGA ACGTGGTAAA ACGGTAAAGG CCGCAGGTTT AGTTGTCGCG
ACTAGGGTGA TGCTGACCAA ACGCGGTTCA AAGATGGGAT TGTTGACACT CGATGACAAG
AGTGCGCGCC TCGAGGTGAT GTTATTTACC GAAGCCTTTG AGAAATTTAA TCACTTGCTC
GAGAAAGATA GGATCCTTAT CTGCGAAGGT GAAGTAAGTT TTGATGATTT TGCTGGTGGT
AATCGGATGA CTGCTCGCAA TATTATTGAT ATTGGTGAGG CGCGTAGCCA TTTTGCTAAG
GCGCTTGAAG TCGACCTTGA TGCCGAGAAG TTAACTCCTG CGGTTTTAGA CAGTATTGAA
CAAGCCATGA GCCCTTGGCG AAGTGGTGCT GTGCCAGTAC TCATTAATTA CAGTCAAACT
CAGGCTAAAG GACAATTTAG ACTTGCTGAG AGTTGGCGAG TTAACCCTTC TGATGAATTA
GTCTTCGCCC TTGAAAGTTT ACTTGGCCCA AATAAAGTTA GGATCGTGTT TTGA
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| Protein sequence | MSDPRFVHLR VHSDFSMSDG VAKVKPILAQ VEALGMAAVA LTDQNNFCGL VKFYSGCHGA
GIKPIIGADF WMQVPGFEGE FCALTIIAMN NVGYQNLTQI ISQAYLRGQV AGRVVIDQEW
LLTYNEGILL LSGAKEGDIG KALLKGNNTQ VESLCEFYQT HFAERYFLEL IRTGRPDEER
YLHMAVVLAQ EKGFPVVATN QVVFLKPEDF DAHEIRVAIH DGFTLADPRR PKKYSEQQYL
RSEEEMCELF ADIPAALSNT VEIAKRCNVT IRLYEYFLPN FPTGDMSIED FLVDCSKKGL
EERLAFLFPD PQVRAERRGE YDERLDIELQ VINQMGFPGY FLIVMEFIQW GKDNGIPVGP
GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMDR RDEVIDHVAE
LYGREAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLIPPEPGMT LAKAFEVEPA
LQESYDADED VKDLIDMCRK LEGVTRNAGK HAGGVVIAPT KITDFAPLYC DAEGKNPVTQ
FDKNDVETAG LVKFDFLGLR TLTIVDWALE MINKVEVKNG RPPVRIEAIP LDDPASFRLL
QRYETTAVFQ LESRGMKDLI KRLQPDCFED MIALVALFRP GPLQSGMVDN FIERKHGREE
VSYPDSQYQH ESLKELLSPT YGIILYQEQV MQIAQVLSGY TLGGADMLRR AMGKKKPEEM
AKQRSIFKEG AIKNGVDGEL SMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKTHYPS
QFMAAVMSAD MDNTDKIVTL VDECERMGLT LIPPDVNKGL FKFTVDDDLR IVYGIGAIKG
VGEGPVESIL EARKDGPFVD LFDFCARIDL KKLNKRVIEK LICAGALDSL GPHRASMMAT
LPEAMRAADQ HAKAQAIGQH DMFGLLNSEP EDSKQQFVEC TPWPDKIWLE GERETLGLYL
TGHPINQYLK ELKYYTSGRL KDVHPTERGK TVKAAGLVVA TRVMLTKRGS KMGLLTLDDK
SARLEVMLFT EAFEKFNHLL EKDRILICEG EVSFDDFAGG NRMTARNIID IGEARSHFAK
ALEVDLDAEK LTPAVLDSIE QAMSPWRSGA VPVLINYSQT QAKGQFRLAE SWRVNPSDEL
VFALESLLGP NKVRIVF
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