Gene Sputcn32_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1362 
SymbolrnhB 
ID5080557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1543455 
End bp1544084 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID640498494 
Productribonuclease HII 
Protein accessionYP_001182889 
Protein GI146292465 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTCT TTAAAGTGCT AACTCCGGCC GATATTGTGG CTTTTTCGAC AGGACTGATT 
GCTGGGGTTG ATGAAGTGGG CCGTGGCCCC TTGGTCGGCG ATGTTGTGAC TGCGGCCGTG 
ATCCTCGACC CAAATCAGCC CATCAGTGGA CTCAATGATT CGAAAAAACT CAGTGAGAAG 
CGCCGTGAAG CCCTGTTTGA TGAGATTTGT GAAAAAGCCC TGTGTTATCA CATCGGCCGT 
GCAAGTCCTG CTGAAATCGA TGAACTTAAT ATTTTGCATG CCACTATGCT TGCCATGCAG 
CGCGCCGTTG CTGGGCTTAA TCTCGCGCCT AAACTCGTGT TAGTGGATGG TAATCGCAGC 
CCATTTTTTA GCCATAATAG TCAGTCAATT GTCAGTCATA GCATCATTAA AGGAGATGGT 
CTTATCGCCA GTATCAGTGC GGCGTCGATT ATTGCCAAAG TGACCCGAGA TCGTGAGATG 
GACGCGCTTG ATGCCGCTTA TCCGCAATAT GGTTTTGCTA AGCATAAGGG CTACCCGACT 
AAGGCACATT TCGAGGCCAT CGCTGAACAT GGTGTATTCG ACCAATACCG TAAAAGTTTT 
AAACCCGTCA AGGCATTACT CGAGGGCTAA
 
Protein sequence
MAVFKVLTPA DIVAFSTGLI AGVDEVGRGP LVGDVVTAAV ILDPNQPISG LNDSKKLSEK 
RREALFDEIC EKALCYHIGR ASPAEIDELN ILHATMLAMQ RAVAGLNLAP KLVLVDGNRS 
PFFSHNSQSI VSHSIIKGDG LIASISAASI IAKVTRDREM DALDAAYPQY GFAKHKGYPT 
KAHFEAIAEH GVFDQYRKSF KPVKALLEG