| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1361 |
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| Symbol | lpxB |
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| ID | 5080556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1542298 |
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| End bp | 1543452 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498493 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001182888 |
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| Protein GI | 146292464 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.505658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA AATCTCAATT AGTGTTTGCA ATGGTCGCCG GAGAACTCTC CGGCGATATT
TTAGGTGCAG GGTTAATGGC TGCACTGCAA AAATCACATC CCGATGCGCG CTTTGTCGGT
ATCGGTGGTC CTCGTATGGA GGCACTGGGT TTTGAATCTC TATTCGCGAT GGAAGAGTTA
GCGGTGATGG GGATTGTCGA AGTGTTATCC CGCTTGCCTC GACTATTAAA AGTACGCGCT
TCTTTGATTA AAGACATCAC TGCCCTAAAG CCTGATTGTT TTATTGGCAT TGATGCACCG
GACTTTAATA TAGGCCTCGA ACTTAAACTC AAAGCGCGTG GTATTAAAAC GGTCCATTAT
GTCAGTCCAT CGGTGTGGGC GTGGCGGCCA AAGCGTATTT TTAAAATTGC TAAGGCCACC
CATATGGTGC TGTCTTTATT GCCCTTTGAG AAAGCTTTCT ACGATAAACA TCAAGTACCT
TGTACCTTTG TCGGTCACAC TTTGGCCGAC GATATTCCGC TGCGAAGCGA TAAAGCGGCG
GCGCGCCAGT TACTCGAACT TGATGCCGAT GCCGAATATT TAGCGATTCT CCCCGGTTCT
CGTGGTGGTG AACTCAAGCA ATTAGCGGAG CCTTTTGTTA AAGCGGCTTT ACTGATTAAA
GAAAATTTCC CCGATATTCG TTTTGTCACA CCGTTGGTCA ACCAGAAGCG TCGTGATCAA
TTTGAGCAAG CGTTGAAAGA TCATGCGCCG GATTTAGAAA TCCACATGGT TGAAGGGAAA
TCAAGGGAAG TGATGACCGC CGCTGATGGT ATTTTATTAG CTTCTGGTAC CGCAACGTTA
GAGGCAATGT TGGTTAAGCG CCCGATGGTT GTCGCTTACC GTGTCAGTCC GCTCACATAT
CGCATTGCTA AGAGCATGAT GCAAGTTAAT CGTTTCTCTT TGCCTAATTT ACTGGCGGGA
AAAGATGTAG TACCTGAGCT TATTCAAGAT GATTGTACGC CAGAGAAAAT TGCCGCAGCG
GTAACGGTTG AACTCAACCG CGATTTTGCG CCGCTGAATG CTGAATTTGA GCGGCTCCAC
CAGATGCTCC GTTGTGATGC GAGCCAAAAG GCCGCAGACG CTGTGATGCG ACTTGTGGAG
ACTAAGGAAG GTTAA
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| Protein sequence | MSKKSQLVFA MVAGELSGDI LGAGLMAALQ KSHPDARFVG IGGPRMEALG FESLFAMEEL
AVMGIVEVLS RLPRLLKVRA SLIKDITALK PDCFIGIDAP DFNIGLELKL KARGIKTVHY
VSPSVWAWRP KRIFKIAKAT HMVLSLLPFE KAFYDKHQVP CTFVGHTLAD DIPLRSDKAA
ARQLLELDAD AEYLAILPGS RGGELKQLAE PFVKAALLIK ENFPDIRFVT PLVNQKRRDQ
FEQALKDHAP DLEIHMVEGK SREVMTAADG ILLASGTATL EAMLVKRPMV VAYRVSPLTY
RIAKSMMQVN RFSLPNLLAG KDVVPELIQD DCTPEKIAAA VTVELNRDFA PLNAEFERLH
QMLRCDASQK AADAVMRLVE TKEG
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