| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1359 |
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| Symbol | fabZ |
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| ID | 5080554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1540944 |
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| End bp | 1541408 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498491 |
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| Product | (3R)-hydroxymyristoyl-ACP dehydratase |
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| Protein accession | YP_001182886 |
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| Protein GI | 146292462 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000691749 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTCTAATC AAATGAACAC TATGGATATT ACAGAGATAC TCAAGTATCT GCCCCATAGA
TATCCATTCC TATTAATTGA TCGTGTGCTT GACTACACCC CTGGTGAAAG TCTACATGCG
ATTAAAAATG TGTCTATTAA TGAGCCTTTT TTTCAGGGAC ATTTCCCTAT ACAGCCAGTC
ATGCCTGGCG TGCTTATTTT AGAAGCGATG GCCCAAGCTA CGGGCTTGCT TGCATTTAAA
ACAATGAGCA ATGATGTGCC TCCTCCTGGA GTGCTTTATT ATTTTGCTGG TATCGATAAT
GCGCGTTTTA GACGTGTGGT TGTGCCAGGT GACCAAATCC ATTTTGAAGT CAAAATGATT
AAAGAGCGCC GCGGGATTGG CGTCTTCTAT GGTGAGGCCA GAGTGGATGG TGAAGTGGCT
TGTTCCGCTG AAATCATGTG TGCCCGCAGA GAGATTAACC AGTGA
|
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| Protein sequence | MSNQMNTMDI TEILKYLPHR YPFLLIDRVL DYTPGESLHA IKNVSINEPF FQGHFPIQPV
MPGVLILEAM AQATGLLAFK TMSNDVPPPG VLYYFAGIDN ARFRRVVVPG DQIHFEVKMI
KERRGIGVFY GEARVDGEVA CSAEIMCARR EINQ
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