Gene Sputcn32_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1358 
SymbollpxD 
ID5080553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1539889 
End bp1540914 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content46% 
IMG OID640498490 
ProductUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
Protein accessionYP_001182885 
Protein GI146292461 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000000561491 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGTG TGACTTTAAA AGAGCTCAGT TTGCTGTTAG ACGGTGTTAT TCAAGGGGAC 
GATACGTTGG TGATTAACAG CGTAGCAACC TTAGAAAATG CGAAATCAGG CCAACTCTCT 
TTTTTAGCCA ACAGTAAATA CCGCTCTCAG CTTGAGGCAA CTCAAGCGAG TGCGGTGTTA 
TTGTCCGCTA AAGAGGCGCA GGAGTATCAA GGCACTGCGT TAATTGTAAA AGACCCTTAT 
GTGGCTTTTG CCCGTACAGC CCAATTTTTA GATACTACGC CTCAAGCGGC CGTTGGTATT 
CATCCTTCAG CGCAAATTGA TCCTTCAGCT CGTTTAGGCG AAGGGGTGGC TATTGGTGCC 
AATGCGGTGA TCGGGGCTAA TGTTATCCTC GGCGAGAATG TGCAGGTCGG TGCAGGCACT 
GTGATTGGCC AAGATGTGAT TATTGGTTCT AACACTCGTC TGTGGGCGAA TGTGACTATC 
TACCATGATG TGCATTTAGG TCAACATTGT ATTATCCATT CTGGCGCGGT ATTGGGATCA 
GATGGTTTTG GTTATGCTAA TGAGCGTGGT CAGTGGGTTA AGATCCCACA AACCGGTGGT 
GTACGTATCG GCGATCGGGT TGAGATTGGT GCGAGTACAA CGGTAGATCG CGGCGCTTTA 
GGCCATACCG AGATCCATAA CGGCGTAATT ATCGATAATC AAGTGCAGGT TGCCCATAAC 
GATATCATAG GTGAGAATAC TGCCATTGCG GGAAGTACCA CTATTGCTGG CAGTGTGACT 
ATTGGTAAGT ATTGTATTAT TGGTGGTAAT TGTGCCATCG CGGGTCACCT ATCGATTACT 
GATGGTGTAC ATGTATCGGG CTCAACCAAT ATTACTGGAA ATATGCGTGA ACCGGGTTTG 
TATTCCTCTG CGACTGTTGC AATGGAAAAT AAGGTTTGGC GTAAAAATAC AGTTCGCTTC 
CGTCAATTGG ATGAGTTGTT CCTGCGCGTT AAAACGCTGG AAAAGAATTT AAAAACCCCA 
GATTAA
 
Protein sequence
MKSVTLKELS LLLDGVIQGD DTLVINSVAT LENAKSGQLS FLANSKYRSQ LEATQASAVL 
LSAKEAQEYQ GTALIVKDPY VAFARTAQFL DTTPQAAVGI HPSAQIDPSA RLGEGVAIGA 
NAVIGANVIL GENVQVGAGT VIGQDVIIGS NTRLWANVTI YHDVHLGQHC IIHSGAVLGS 
DGFGYANERG QWVKIPQTGG VRIGDRVEIG ASTTVDRGAL GHTEIHNGVI IDNQVQVAHN 
DIIGENTAIA GSTTIAGSVT IGKYCIIGGN CAIAGHLSIT DGVHVSGSTN ITGNMREPGL 
YSSATVAMEN KVWRKNTVRF RQLDELFLRV KTLEKNLKTP D