Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1357 |
Symbol | |
ID | 5080552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1539388 |
End bp | 1539885 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640498489 |
Product | outer membrane chaperone Skp (OmpH) |
Protein accession | YP_001182884 |
Protein GI | 146292460 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000591306 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAATC GCGCCCTGAT GACATTGGTT TTATTAGGTG CGCCATTAAT GGCACATGCT GAGAAAATAG CCGTTGTGGA TATGGGCGAA GTGTTTGAAC AGTTGCCACA ACGCGAACAG ATCTCTCAAG CGCTTAAAGC TGAGTTTGGT GATCGCATGG CCGATGTACA AAAGATGCAA GAAGAAATGC GTTCTCTGAT GGAGAAGCAG CAACGTGATG GCGCGTTAAT GAATGACACG CAAAAAACGG AGCTGGTTCG TAAAATGGAA TCGCTAAAAT CTGAATATCA GTTAAAAGGC AAAGCACTCG ATGAGGATTT ACGTCGTCGT CAAGGTGAAG AGCAAAATAA ACTGTTAGTT AAAGTGCAAA AAGCCATTAA TACAATCGCT GAAAAAGACC AATATGACTT GGTATTACAA CGCGGTGCCG TCATTTATGT TAAGCCAAAC GCTGACATCA GTGGCAAAGT GGTTGAAGCC TTGAGTAAAG GCAAGTAA
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Protein sequence | MVNRALMTLV LLGAPLMAHA EKIAVVDMGE VFEQLPQREQ ISQALKAEFG DRMADVQKMQ EEMRSLMEKQ QRDGALMNDT QKTELVRKME SLKSEYQLKG KALDEDLRRR QGEEQNKLLV KVQKAINTIA EKDQYDLVLQ RGAVIYVKPN ADISGKVVEA LSKGK
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