| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1356 |
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| Symbol | |
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| ID | 5080551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1536843 |
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| End bp | 1539323 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498488 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001182883 |
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| Protein GI | 146292459 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000205975 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTGA ATAAACTTTT TGCCTCGATG TTATTCGTCG GTGCGTCGTT TTCAGGGACT
GTGTTGGCGG ATACTTTCCA ACCCTTTGAA GTGACCGACA TCCAAGTTGA AGGTTTGCAG
CGAGTCGCAC TTGGTGCTGC CTTGTTAAGC TTACCAGTAA AAGTAGGTGA CACTGTTGAT
CAGTTAAGAA TTCAACAAGC CATTAAAAGC CTGTATGCAT CGACTAACTT TGAAAATGTC
TCTGTCAGTC GTGACGGCGG TGTCTTGGTG GTGAAAGTCA CCGAACGCCC AACCATCAGT
GCTGTGACAT TTGAAGGCAA CAAAGACATT AAAGACGAAC AGTTACAGGA AAGTCTGGAC
GGTTCTGGTG TTAAAGTCGG TGAGTCGCTC GATCGCACTA TGCTGACAGG CATTGAAAAA
GGTTTGCAGG ATTTCTACTA CGGCGTAGGT AAATACGGCG CCAAAGTTGA AGCTCAGGTG
ATCAACTTAC CCCGAAACCG CGTTGAACTA AAATTTAAAT TTACCGAAGG GTTAGCGGCT
GAAATTCGCC AAATTAACGT GGTTGGTAAT AAAGAGTTCA CCGATGCTGA GCTTATCGGC
ATGTTGGAAC TGAAAGATTA TGTGGCTTGG TGGGATTTAT TTGGTGAGCG CCGCTACCAG
AAGCAAAAGC TTCAAGCCGA TCTCGAGACT ATCAAAACCT ATTATCACAA TAAGGGTTAT
ATCCGCTTTG AAGTCACTTC GACTCAAGTG GCGATGACAC CTGACCGCAA AGGTTTATAT
ATCACCATCA ACGTTAATGA AGGTGAGAAA TATAAAGTAA AAGACATCAA TTTAACCGGC
GATTTAATGG GTCGTGAAGA ATTGATGCGA TCTATTTTAC CGATTAAAGC GGGTGATATG
TACAACGGCG GTGATGTGAC CTTTACCGAA GAAATGTACA GTAAATATTT AGGTCGTTTT
GGTTACGCTT ATCCTGAAGT AAAAACTTAT CCAGAAATTG ATGATAAAAC GAAAGAAGTG
ACGTTAAACA TCAATGTTAA ACCAGGCAAA CGGGTTTATG TTCGTGCGAT TAACTTTACG
GGTAATACTG TTACTAAAGA TGAAGTGATG CGCCGTGAAC TGCGTCAGAT GGAAGGTGCG
TGGTTAAACT CGGCACAAGT TGAGCAATCA AAAGCGCGTC TTAACCGTTT AGGCTATTTT
GAAACTGTTG ATACTGAAAC TATTCAAGTT CCTGGCACCG ATGATTTAGT TGATATCGCT
GTAAAAGTGA AAGAACAGCC ATCAGGTTCA TTTAATGCAG GTGTGGGTTA CGGTACTGAA
TCAGGTTTAA GCTTGCAGTT TGGCGTGCAG CAAAACAACT TCTTAGGTTC GGGAAATCAA
GCTGGCATTA GTATGAGTAC CAACAAATAC TCGAAAAATG TCAACTTATC TTATACCGAT
CCCTATTGGA CTAAAGATGG CGTGAGCTTA GGGGGAAGCA TTTATTGGAG TGAATTTGAC
GCCAATGAAG CTAACTTAGA ACGCTATAAA AACAGTTCGT ATGGTGTGGC GCTTAACTCA
GGTTTCCCAA TTAACGAATA CAACCGTATT AATGGTGGTA TTGGTTATCG TCATAACACG
ATTTCTGAAA TTTCAGCCTA TGAGCAAGCA CTGCGTTTCT ATAATATTTA TCGAAACGAT
GATCCTAATG CCGACTTAAG TTTTGATAAC TTTGAGCTGA GTTTAGGTTG GTCACGCAGT
ACCTTAAACC GTGGCACTTT CCCAACGGAT GGTTCATCAC AACGTCTAAA CGGTAAGATG
ACGGTTCCTG GTTCAAACCT GCAATACTTT AAAACTGATT TTGATACCAA CTATTACTTC
CCTGTTACCC GCAGTCATAA CTTTGTGGTC TTAGCTCGTG GCCGTTTAGG TTATGGTAAC
GGTTACGGTG AGTACAATAA TAATGAGCAA ATTCTACCTT TCTGGGAAAA CTATTATTCC
GGCGGTAGCA CCTCATTACG TGGCTTTAAG TCAAACTCGG TTGGTCCTCG TTCATTCTAT
CTCTACCGTG GTAGTGAGCC TTGTGCACCT GATCCATCAG GTGATGGTTG TAGTTTACCG
GGCGATCCTA ACAGTATTCA GGTGAGTTCA GGTCGTTCAA TAGGTGGTAA TGCGATTGCA
ACGGCAAGTA TGGAGTTTAT TGTACCCACA CCGTTCTTAG ATGAGGCCTA TTCAAATTCG
GTGCGTACAA GTTTCTTCCT CGATGCTGGT AACGTATGGG ATACAGAGTT TGATTTTGAT
GCTTACCAAA CACTTCCTGC TGAGGAATTT GCTAAATTGC AGGATTATAG CGATCCATCG
CGTATCCGCG CCTCTTGGGG GGTGAGCCTA CAATGGTTAT CACCAATGGG ACCTATGGTA
TTTAGCTTAG CGTGGCCACT TAAGGAATAC GAAGGCGATC AAACAGAGAT CTTTTCGTTC
AATATTGGCA AAACTTTTTA A
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| Protein sequence | MRLNKLFASM LFVGASFSGT VLADTFQPFE VTDIQVEGLQ RVALGAALLS LPVKVGDTVD
QLRIQQAIKS LYASTNFENV SVSRDGGVLV VKVTERPTIS AVTFEGNKDI KDEQLQESLD
GSGVKVGESL DRTMLTGIEK GLQDFYYGVG KYGAKVEAQV INLPRNRVEL KFKFTEGLAA
EIRQINVVGN KEFTDAELIG MLELKDYVAW WDLFGERRYQ KQKLQADLET IKTYYHNKGY
IRFEVTSTQV AMTPDRKGLY ITINVNEGEK YKVKDINLTG DLMGREELMR SILPIKAGDM
YNGGDVTFTE EMYSKYLGRF GYAYPEVKTY PEIDDKTKEV TLNINVKPGK RVYVRAINFT
GNTVTKDEVM RRELRQMEGA WLNSAQVEQS KARLNRLGYF ETVDTETIQV PGTDDLVDIA
VKVKEQPSGS FNAGVGYGTE SGLSLQFGVQ QNNFLGSGNQ AGISMSTNKY SKNVNLSYTD
PYWTKDGVSL GGSIYWSEFD ANEANLERYK NSSYGVALNS GFPINEYNRI NGGIGYRHNT
ISEISAYEQA LRFYNIYRND DPNADLSFDN FELSLGWSRS TLNRGTFPTD GSSQRLNGKM
TVPGSNLQYF KTDFDTNYYF PVTRSHNFVV LARGRLGYGN GYGEYNNNEQ ILPFWENYYS
GGSTSLRGFK SNSVGPRSFY LYRGSEPCAP DPSGDGCSLP GDPNSIQVSS GRSIGGNAIA
TASMEFIVPT PFLDEAYSNS VRTSFFLDAG NVWDTEFDFD AYQTLPAEEF AKLQDYSDPS
RIRASWGVSL QWLSPMGPMV FSLAWPLKEY EGDQTEIFSF NIGKTF
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