Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1355 |
Symbol | |
ID | 5080550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1535441 |
End bp | 1536811 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640498487 |
Product | putative membrane-associated zinc metalloprotease |
Protein accession | YP_001182882 |
Protein GI | 146292458 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000225455 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGATT TTTTATGGAA CTTAGGTTCT TTTATCGTGG CGTTGGGGTT GTTAATTACC GCCCACGAAT ACGGTCATTT CTATGTCGCG CGTCGCTGCG GCGTTAAAGT CGAGCGTTTC TCTATTGGTT TTGGCAAGGC CATTTGGCGC CGTATGGGTA AAGATGGCAC TGAATATGTG GTCGCCATGA TCCCCCTCGG TGGTTACGTC AAAATGCTCG ATGAGCGTGT CGAAGATGTG CCTGACGAGC TAAAACATCA GGCGTTTAAT CGTAAAACGG TATGGCAACG TATTGCGATT GTTGCCGCAG GCCCGATAGC CAACTTTATT TTTGCTATTA TCGCATTGTA TTTTATGTAC TTGATTGGTG TGCCATCACT TAAACCGGTG ATCACTTCTA CGATTCCAGG AACTGCTGCT GCGCAAATTC AAGTCACTGA ACCTATGCAA GTGACGGCAA TATCAGGTCA GCGTGTGCGC AATTGGGAAG AGGTGAATCT TGCGCTTGTT GGTCATATTG GTGATCCCAG CTTGAGTGTT TCCCTTGCGC CATTAAATAG TTTGCAGGGG TTTGAGTCAA ATGCCAGAAC CTATACGTTA GATACACGCC AATGGCGCTT TGATCCTGAA AAGGAATCAC CGATAACCAC CTTAGGGTTA GGGATTTATC GTCCAGAGAT TGAACCTAAG GTTGCCTTAA TCAGTGAAGG AAGTGCTGCA GCAAATAGTG AGTTAAAGGT TGGCGATACG CTCGTTGCTA TCAATGATGA ACCTTATACC GATTGGCAGG CTTTTGTTGA CATTATTCAA CATTCTGCCA ATGTGCCTGT GAGTATAATG GTGCGTCGCG ATGGCGAACA GTTTGTGGTT ACTGTGACGC CGACAAGTAC AAAAAATGCT GAAGGTAAAG AGATTGGGGT ACTAGGTGTC AGCCCCGCAC AGGCACAATG GCCTGAGAAT ATGCGTTTAC AACTAGAATA TGGGCCAATC GATTCTTTTG CTATTGCTGC AGATAAAACA TGGCAACTTG TTGCAGTCAG CTTTAAGATG ATTGGCAAAT TATTTACCGG CGATGTGTCG GTGAAAAACC TGAGTGGACC CATCTCGATA GCACAGGGTG CGGGCAGTAG TGCAAACTAT GGCTTGGTCT ATTTTCTCGG GTTCCTCGCG CTCATCAGCG TCAATTTAGG CATCATTAAC TTGCTGCCTT TACCTGTGCT CGATGGGGGA CACCTGCTGT ATTACTTTAT TGAAGTAATA ACTGGTAAAC CTGTGCCTGA AAAGGTGCAG GAAATAGGAT TCAGATTTGG GGCAGCAATA CTGCTGATGT TGATGAGCAT TGCGCTTTTC AATGATTTTG CCCGACTCTG A
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Protein sequence | MLDFLWNLGS FIVALGLLIT AHEYGHFYVA RRCGVKVERF SIGFGKAIWR RMGKDGTEYV VAMIPLGGYV KMLDERVEDV PDELKHQAFN RKTVWQRIAI VAAGPIANFI FAIIALYFMY LIGVPSLKPV ITSTIPGTAA AQIQVTEPMQ VTAISGQRVR NWEEVNLALV GHIGDPSLSV SLAPLNSLQG FESNARTYTL DTRQWRFDPE KESPITTLGL GIYRPEIEPK VALISEGSAA ANSELKVGDT LVAINDEPYT DWQAFVDIIQ HSANVPVSIM VRRDGEQFVV TVTPTSTKNA EGKEIGVLGV SPAQAQWPEN MRLQLEYGPI DSFAIAADKT WQLVAVSFKM IGKLFTGDVS VKNLSGPISI AQGAGSSANY GLVYFLGFLA LISVNLGIIN LLPLPVLDGG HLLYYFIEVI TGKPVPEKVQ EIGFRFGAAI LLMLMSIALF NDFARL
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