| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1339 |
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| Symbol | |
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| ID | 5080966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1518411 |
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| End bp | 1519238 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498471 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_001182866 |
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| Protein GI | 146292442 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCTTG ATATGCCAGA TGATGAATTA GATCATGTGG TATTGGATAA TACCGATGAG
CAAGCGCCCG ATATTCGAAT CCTCTTTGAA GATGAACATA TTGTAGCGAT CCATAAACCC
GCAGGTTTAT TAGTACATCG CAGCTATTTG GCTCGCCGCG AGCGTTTTTT TGCCATGCAG
TTAACTCGTG ATTTAGTTGG GTGTCATGTG TTCCCTGTGC ATCGTTTAGA TAGACCAACT
TCTGGCGTGT TATTATTTGC CAAGAGCAGT GAAGTTGCTA ATGCGTTATG TGAGCAATTT
GCTGAGCATT CCATAGAGAA ACAGTATCTT GCGCTAGTTC GTGGCAACAT GCATGAAAGT
GGGATATTGG ATTATCCCCT CAAAGTTGAA CTTGATGAGC TTGGAGATAA ACATGCCCGC
CAAGATAAAG CAGCACAGGA TGCCGTTACG GCTTTTAAGC CCTTACTCAA TGCTGAAATT
CCATATCCAT CGGGACGATA TCCGACGAGC CGCTTTGCAT TAGTGCAACT TACCCCAAAG
ACTGGACGTA AACATCAGCT TAGAAGACAC ATGGCACATT TACGCCATCC CATTTTAGGA
GATACAACCC ACGGTGACGG AAAACAAAAT ACCTTTTTCC GCGAGCATTT CGGCATTAAT
CGTTTATGGC TTATCGCGAA AAAGCTCACT TTCACGCATC CTGTCACTCA ATCTCGACTC
AGTATTGAAA CCGAGCTTGA ACAACAATGG GAAACGGTGT TCACAGGACT TGGCTGGGAT
GACGTTGTCT TGAGCAATGA TGCGCCATTT TTGATCGCTA AAAATTAG
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| Protein sequence | MWLDMPDDEL DHVVLDNTDE QAPDIRILFE DEHIVAIHKP AGLLVHRSYL ARRERFFAMQ
LTRDLVGCHV FPVHRLDRPT SGVLLFAKSS EVANALCEQF AEHSIEKQYL ALVRGNMHES
GILDYPLKVE LDELGDKHAR QDKAAQDAVT AFKPLLNAEI PYPSGRYPTS RFALVQLTPK
TGRKHQLRRH MAHLRHPILG DTTHGDGKQN TFFREHFGIN RLWLIAKKLT FTHPVTQSRL
SIETELEQQW ETVFTGLGWD DVVLSNDAPF LIAKN
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