Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1327 |
Symbol | |
ID | 5080954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1508545 |
End bp | 1509414 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640498459 |
Product | transcriptional regulator, putative |
Protein accession | YP_001182854 |
Protein GI | 146292430 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACTA GCGCAACTGA TGAAAAGCCC CCGGAGAAAA CGGGAAAGCT TCGAGCGAGT CGAGAAGAAA AGCACACTCA ATCGAGGCAT AGCAATGCGA CTACCACGCC TGAGATGAGA CTCTTTATTC AGCAATCGGA TCTGAGTGTG AGTCAGCTTG CCAAAATTCT AAATATCACC GAAGCCACAG TTCGCAAATG GCGTAAACGT GAGTCGATTG TTGATTGTCC CAATACTCCG CATCACCTCA ATACCACGCT CACACCGATG GAAGAATATG TGGTTGTCGG CCTAAGATAC CAATTAAAAC TCCCCTTAGA CCGGCTACTA AAAGCCACTC AAACCTTTAT TAATCCCAAT GTGTCGCGCT CCGGCCTTGC CCGCTGCTTA AAGCGCTACG GCATATCGCG ACTCGATGAA TTTGAAGCAC CGCAAGTCCC CGAACGCTAT TTTAATCAAT TGCCTGTGAC GCAAGGCATC GATATCCAAA CCTATACGGT CAATCCAGAA ACCTTGGCCA AAGCCCTCGC ATTGCCGAGT ACCGACGGCA ATACTGTGGT GCAAGTAGTG TCACTCACCA TACCGCCGCA GCTCACTGAG CAAGCGCCAA GCTCAGTACT ATTAGGCGTA GACACAGCAA GTGATTGGAT TTACCTCGAT ATTTATCAAG ACAGCAATAC CCAAGCGACC AATAGATATA TCGCCTATGT CCTCAGACAT GGGCCGTTTC ATTTACGAAA GTTGCTCGTT CGCAACTATC ACACCTTCTT AGCCCGTTTT CCCGGTGCCC ATGGCACGCC AAAGACAAGC GCGGCTGGAT CCCAAAACAA GGTCACCGTA TCCAGGTCGA CCCGTGGAGA CTCTTTATGA
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Protein sequence | MTTSATDEKP PEKTGKLRAS REEKHTQSRH SNATTTPEMR LFIQQSDLSV SQLAKILNIT EATVRKWRKR ESIVDCPNTP HHLNTTLTPM EEYVVVGLRY QLKLPLDRLL KATQTFINPN VSRSGLARCL KRYGISRLDE FEAPQVPERY FNQLPVTQGI DIQTYTVNPE TLAKALALPS TDGNTVVQVV SLTIPPQLTE QAPSSVLLGV DTASDWIYLD IYQDSNTQAT NRYIAYVLRH GPFHLRKLLV RNYHTFLARF PGAHGTPKTS AAGSQNKVTV SRSTRGDSL
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