| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1323 |
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| Symbol | |
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| ID | 5080950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1490597 |
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| End bp | 1492255 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640498455 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_001182850 |
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| Protein GI | 146292426 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.596001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACAC CTATGACTAG CCATACTCTA GATCAATACA ATAGCAATAA CGAAAAACTC
AGCCCTTGGC CGTGGCAAGT CAACGATGCC GCGCTGAGCT TTGATATCGA CTCATTAGGC
AAAAAACTCA AAGATTTAAG CCAAGCCTGT TACTTAGTCA ATCACAGCGA AAAAGGCTTA
GGCATAGCGC AAACGGCCGA AGTAACCACA AGCGACAGCC AAGCGCCTCT TGGCTCACAC
CCCGTCAGCG CCTTTGCGCC CGCCCTTGGC ACCCAAAGTT TAGGCGACAG TAATTTTCGC
CGCGTACACG GGGTTAAATA CGCTTACTAC GCCGGCGCTA TGGCCAACGG TATTGCCTCG
GAAGAACTGG TTATTGCGCT GGGCCAAGCG GGCATTTTGT GCTCATTTGG CGCGGCGGGG
TTAATTCCAT CCCGCGTTGA AGCGGCCATT ACCCGCATTC AAGCGGCGCT GCCCAATGGC
CCTTACGCTT TTAACTTAAT TCACAGCCCA AGCGAGCCCG CATTAGAGCG CGGCAGCGTT
GAGCTGTTTT TAAAACATAA AGTGCGCACA GTCGAAGCCT CGGCATTTTT AGGTTTAACG
CCGCAGATCG TCTATTACCG CGCAGCGGGA TTGAGCCGCG ACGAACATGG CGAAATAGTC
ATTGGCAACA AAGTCATCGC AAAAATCAGC CGTACCGAAG TCGCGACTAA GTTTATGGAA
CCGGCGCCTG CCAAAATCCT CCAGCAACTA GTGAGTGACG GTCTTATCAG CCAAGACCAA
ATGGCGATGG CATTGCTTGT GCCGATGGCG GATGACATCA CAGCCGAAGC CGACTCTGGC
GGCCATACCG ACAATCGTCC GTTAGTCACG CTTTTGCCGA CGATTTTGGC ACTCAAAGAT
GAAATCCAAG CTAAGTATCA ATACAAGACG CCCATCCGTG TTGGTGCTGG CGGCGGCGTT
GGTACACCCG ATGCAGCATT AGCCACCTTC AACATGGGCG CGGCCTTTAT CGTCACAGGT
TCAATCAACC AAGCATGTGT GGAGGCGGGC GCGAGTGAAC ACACACGTAA GTTACTCGCC
ACCACAGAAA TGGCCGATGT GACTATGGCA CCTGCCGCCG ATATGTTCGA AATGGGCGTG
AAATTACAAG TGGTTAAGCG CGGCACTCTG TTCCCGATGC GCGCCAATAA GCTGTATGAA
ATCTACACCC GTTACGATTC GATTGATGCC ATCCCTGCGG ACGAGCGTAA AAAGCTCGAA
GAGCAAGTGT TCCGCTCATC ACTCGATGAT ATTTGGGCTG GCACAGTCGC CCACTTTAAC
GAGCGCGATC CTAAGCAAAT CGAGCGCGCA CTGGATAACC CCAAACGTAA GATGGCGCTG
ATTTTCCGCT GGTATTTGGG TTTATCGAGC CGCTGGTCAA ACACAGGTGA AGTCGGCCGC
GAAATGGATT ACCAAATCTG GGCAGGCCCT GCCCTTGGCG CATTTAATGC GTGGGCCAAA
GGCAGTTATT TAGATGACTA TAAGGCCCGT AATGCGGTGG ATTTAGCCAA ACATTTAATG
GTGGGCGCGG CGTATCAAGC GCGGATTAAC CTGCTGTTAT CCCAAGGCGC GAGCATTCCA
GTTAGCCTGC AACGCTGGAA ACCGCTAAAT CGTTTTTAA
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| Protein sequence | MRTPMTSHTL DQYNSNNEKL SPWPWQVNDA ALSFDIDSLG KKLKDLSQAC YLVNHSEKGL
GIAQTAEVTT SDSQAPLGSH PVSAFAPALG TQSLGDSNFR RVHGVKYAYY AGAMANGIAS
EELVIALGQA GILCSFGAAG LIPSRVEAAI TRIQAALPNG PYAFNLIHSP SEPALERGSV
ELFLKHKVRT VEASAFLGLT PQIVYYRAAG LSRDEHGEIV IGNKVIAKIS RTEVATKFME
PAPAKILQQL VSDGLISQDQ MAMALLVPMA DDITAEADSG GHTDNRPLVT LLPTILALKD
EIQAKYQYKT PIRVGAGGGV GTPDAALATF NMGAAFIVTG SINQACVEAG ASEHTRKLLA
TTEMADVTMA PAADMFEMGV KLQVVKRGTL FPMRANKLYE IYTRYDSIDA IPADERKKLE
EQVFRSSLDD IWAGTVAHFN ERDPKQIERA LDNPKRKMAL IFRWYLGLSS RWSNTGEVGR
EMDYQIWAGP ALGAFNAWAK GSYLDDYKAR NAVDLAKHLM VGAAYQARIN LLLSQGASIP
VSLQRWKPLN RF
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