| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1314 |
|---|
| Symbol | |
|---|
| ID | 5080941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1482887 |
|---|
| End bp | 1483513 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640498446 |
|---|
| Product | fumarylacetoacetate (FAA) hydrolase |
|---|
| Protein accession | YP_001182841 |
|---|
| Protein GI | 146292417 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGG TAATGTTAGG TGAGTCGGCC GTAGTGCCAA CAAAAATTAT CTGTGTTGGG
CGGAATTATG TGGATCATAT CCATGAGTTA GGCAATGAAA TACCTGAGGA TATGGTGGTA
TTCCTAAAAC CTAATTCAGC GATAACGACC GAGCTTCACT CACAACATTT GGGTGAAACG
CTGCATTATG AAACTGAACT TTGCTTTATG TTCCTGCATG GTCGTTTTAG TCATGTTGCA
GTGGGTTTAG ATCTCACAAA ACGTGATTTG CAAACTAAGT TAAAAGCTAA GGGATTGCCT
TGGGAGCGAG CAAAAGCCTT TGATGGTGCA GCGTTATTCA GTCCGTTTGT GGCGATTGAT
GATGCAGAGG CACCACTGCA TTTCACCTTG AGTATCAATG ACAAGCTAGT CCAAGAGGGG
CATATCGATT TAATGATTTA CAAACCTCAA ACCATATTGT CCGAGCTACA GGCATTTATC
AGTCTCGATG AGGGCGATAT TGTGATGACA GGCACACCCA AGGGCGTGGG AAGTATTCCC
GCTAAAAGTG TATTTAACGT CACGCTGAGC CGTGGCCTGC AAGCGGGGGC TGAACCTTTG
CTCGAATATC AATGGCTGAG TGTTTAG
|
|---|
| Protein sequence | MKTVMLGESA VVPTKIICVG RNYVDHIHEL GNEIPEDMVV FLKPNSAITT ELHSQHLGET
LHYETELCFM FLHGRFSHVA VGLDLTKRDL QTKLKAKGLP WERAKAFDGA ALFSPFVAID
DAEAPLHFTL SINDKLVQEG HIDLMIYKPQ TILSELQAFI SLDEGDIVMT GTPKGVGSIP
AKSVFNVTLS RGLQAGAEPL LEYQWLSV
|
|---|
| |