Gene Sputcn32_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1311 
Symbol 
ID5080938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1478965 
End bp1479543 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content48% 
IMG OID640498443 
ProductMarR family transcriptional regulator 
Protein accessionYP_001182838 
Protein GI146292414 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCTA AAATGACGCT AACTAATGCC AGTCCTGCGG ATACTAACGC GAGTTCTACG 
GATACAAAGA AAGCGGATTC GAATACCAAA GAAGATGGCC TCGATAGAAT TGTTGAACAG 
TGGCAACAGC AAGGTGTGAC TGAGGATTTG ATCCCTATGG CTGTGCTCGG GCGAATCGCT 
CGTTTAACGA AATATATCGA AGTGGTACTG CTGCAATGCC ACGCCGAATT TGGCTTAGGT 
CAGGGGGAGT TCGATGTGCT CGCGACGTTA AGGCGCTCGG GAGAGCCGTT CACACTCTCG 
CCTTCGCACC TTTATCAGAG CATGATGCTA AGTTCTGGCG CTATGACCAG TCGTTTAGAC 
AGACTCGAAA ATAAGGGACT GATCGAACGG GAGCACAGTA AGGAAGATCG TCGTGGTGTC 
CATGTCTCGT TAACTGCTGA GGGTAAGGAG CTCATTGATA AGGCATTACC TCAGCATATT 
CAATGTCAAA GTGCGTTGTT CGCGGGCGTG AGCGTCGAAG ATAGGCCTGT GTTACTGCAG 
ATTTTAAAAT CTTGGCTGAA TCAATTTGAG CCGCAATAA
 
Protein sequence
MTAKMTLTNA SPADTNASST DTKKADSNTK EDGLDRIVEQ WQQQGVTEDL IPMAVLGRIA 
RLTKYIEVVL LQCHAEFGLG QGEFDVLATL RRSGEPFTLS PSHLYQSMML SSGAMTSRLD 
RLENKGLIER EHSKEDRRGV HVSLTAEGKE LIDKALPQHI QCQSALFAGV SVEDRPVLLQ 
ILKSWLNQFE PQ