Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1310 |
Symbol | |
ID | 5080937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1477529 |
End bp | 1478734 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640498442 |
Product | major facilitator transporter |
Protein accession | YP_001182837 |
Protein GI | 146292413 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2807] Cyanate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0992483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGATCCC CCCTGACAGA GAAAGTGAAT TTATTGCTGC TCGGACTCGC GTTCATCCTT ATTGGTCTAA ATCTACGGCC CATTCTCGCC TCCGTTGGGC CTTTACTGCC CAGCATACAA AAGGATATCA GTTTAAGTTT TACCTTAGCG TCTATGCTGA CATTGCTGCC TGTGCTCGCC ATGGGACTGG GTTGTTTTGC AGGCTTTAGT ATCGCTAAAC GCTTAGGATT CAATACCGTA ATGACGGGAT CATTGCTACT GCTGATCGCC GCTACTGCAA TGCGCTTCTG GGCGATAGAT GCCAATTGGC TTATCTGCTC GGCATTACTG GCAGGGGTCG CAATCGCCCT CATTCAAACC ATAATGCCCG CCATGATTAA GCTTAATTTC GGTGAACGGG TGCCCTTAAT GATGGGGCTT TACGTCACTG CAATTATGGG CGGCGCCGCA TTAGCGGCGA GTAGCGCGCC TTTTATCGGG ATGAACTTAG GTTGGCGCGC GGGTCTAGGT CATTGGACTT GGCTAGGCAT ATTCGCACTC GTGCTGTGGC TCCTGATTAA ACATAAAGCC GCATTACCGA GCCAAGCAAA AGAGCAAGCT TTGCAACTTA ACTTTTGGCG TTTTCGTCGC AGTTGGCTAT TGGCGATATT TTTTGCATTA GGTACAAGTT GTTATGTCTG CGTACTTGCA TGGTTAGCCC CCTACGCGGT CGAGCTAGGT TATAGCCAAA CTCAATCTGG ATTAGTGTTA GGTTTTTTAA CCAGCATGGA AGTGATCGCG GGCTTAGTGT TTCCTTGGCT TGCCAGCAAG TCGACGGACA GACGTGCCAT CATAGCCCTA CTCTGCTTGC TACAACTCAT TGGCTTTATG GGACTGGCAC TCGCCCCTCA AGTATCGCTA TTTTTATGGG CGGGACTTGC AGGATTAGGT ATTGGCGGGA TTTTTCCACT CGGGCTGATT GTCACTATGG ATCATCAACA AAATCCTATG TTAGCAGGTA AATTAACCGC CTTCGTGCAG GGTGTGGGAT ATACCATAGC GGCTATCTCG CCTTGGATTG CCGGATTAAT TCGCGATAAT TTCAACAGCT TTAACAGTGC TTGGTTATTA CTCGGTGGCT TAAGTGTGAT CGCGTGGATA TTATCTTGGC AATTTAATCC GCAGGGCTAT GCACGCCAAT ATCAAATCAC CCGCTGCGTA TCTTAA
|
Protein sequence | MRSPLTEKVN LLLLGLAFIL IGLNLRPILA SVGPLLPSIQ KDISLSFTLA SMLTLLPVLA MGLGCFAGFS IAKRLGFNTV MTGSLLLLIA ATAMRFWAID ANWLICSALL AGVAIALIQT IMPAMIKLNF GERVPLMMGL YVTAIMGGAA LAASSAPFIG MNLGWRAGLG HWTWLGIFAL VLWLLIKHKA ALPSQAKEQA LQLNFWRFRR SWLLAIFFAL GTSCYVCVLA WLAPYAVELG YSQTQSGLVL GFLTSMEVIA GLVFPWLASK STDRRAIIAL LCLLQLIGFM GLALAPQVSL FLWAGLAGLG IGGIFPLGLI VTMDHQQNPM LAGKLTAFVQ GVGYTIAAIS PWIAGLIRDN FNSFNSAWLL LGGLSVIAWI LSWQFNPQGY ARQYQITRCV S
|
| |