| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1308 |
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| Symbol | |
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| ID | 5080935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1474519 |
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| End bp | 1476732 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498440 |
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| Product | TonB-dependent heme/hemoglobin receptor family protein |
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| Protein accession | YP_001182835 |
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| Protein GI | 146292411 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTTATC AGCCTAAATT AGGGAAGTTA AAAACGAAAG TCAGTCTATT TGTTGTGGGG
ATTTTACCTT CACTACCGTT ACTTGCATCG GATGTTCTGG GTGAACCGAA AGTACAGCCC
ATTGAAGTCA TACAAGTTCA CGGACAACAG TATCGACGTG TGATGACGGT GACTAAACCC
GGTGAAGCGA TTATTTCCAT GGATCAAATC GAGGAGATGC AGGCGACAAC TTTCGCCGAA
GTGATCGATG ATATGGCCGG CGCCCATATT GATGGCGGCA CTCGCAGTGG TGGTGAACGT
ATTAATGTCT GGGGCTTTGG CGAGACTGAA GATTTTAATG TTTATGTGGA TAATGCTCCG
GTGGGATTTG AGCAGTATCG CTATGGATCA TTTTTCCTCG ATCCTGATCT CATCAAGCGA
GTGGAAGTGA TTAAAGGTGC CCATGATGTG CGCTCTGGCA ATGGCGGTTT TGGTGGTGCC
ATGTATGTTG TCACTAAATC GGCTGATGAT TTTCTTAAAT ATGATCAATC CCTTGGCGCG
CGAGTCAAAA CCAGCTACGC CAGCAATAAT GACGCTATGG GTTATACGGG GACAGTTTAT
GGCCGCGTGA ATTCATCTCT ATCTGGTTTG CTGCATCTGA CGCGTCGCGA TGCGGGGGAC
GTCACCTTAG CCAATGGTGA AGAGTATGAA TATTCAGGCT ATGAGCAAAA TAACTACCTA
GGTAAGATGG ATTACGCACA GGGCGATCAC CAATTAGCGT TGAGCGTGAC CCATTATCTT
GATGAGGGCC GCAAACCTTG GGCTAACCGC CGTGGCCCTA TGCCTGCAAT TTCGGACTAC
AACATCAAAA AGTACGGTTC CTACGAGCAG GCTCTGTATG CCACAACCGC CTACAACACT
TATGAAGACA ACACTTGGTC GGCTAATTAT CGCTATTCGC CGAGTAATCC CCTGATCGAT
ACCCAAGTGG TCATTTCCCA TTCGGCGAAT GCACGCCACT GGGTAAGACC CGATATCGCG
TGGGAGAAAA TGACGGTTTC CGTAGGCAAC TTCGGCCATG AATCTTGGCT AGATTACAAA
CGTGACTACA TTGATATCAA TAACTTGAGT TTGATTGGCG ACCATGAGAT CACCACTGGA
TTACAGTACC GTAGTCTTGA CCGCACTTCG CTTGTGTTTA ACAAGAGTTA TGAGAAGAAT
CCTGAGAAAA ACTTTGGCTG GTACACACCT TACTATCAAC CTGAAGGTCG CCAAGACACC
TATGCCGCCT ATGTTCGCGA TGCAATTCAT ATTACTAATG ACTTAACTGT GACTCCCTCG
CTGCGATATG ACTTTATCTA CAGTATAGGT AGGCCAAATA TTGCGCCAGA TTACAACGAT
ATTGCTGCGG GCCACGACTA TAGCTCGACC CATCATTCGG GTTTCTCACC AAGATTAGGT
ATAGATTACC AACTGACAAA TCACGCTCGG TTAAACTTTG ATTACGCCTA TAGTCTGCAA
GCCCCTGTGG TGGATGAAAT TTATGCCGTG CAATACGCTA AGGCGAGTAT CACTGGCACG
AGTCGCAACA TTGATGTCGA ACGCTTGCAT GCCTTCAAAT TAGGCCTAAT GACGCAGCAC
CAGCATGTAC TTGCCAATGA GGATGCCTTA TCGACGCAAA TCACCCTGTT TGCCAACTTA
GGCCGTGATG ATATTGCCCA GCGCCGCGGA GCTAAGTCTG ATAAAACCCA TTTAATTCAA
AGTGGTTACA CAAATCTTGA TGGTTACCAT ATTTACGGTG CCGATTTTGA AGCCCAATAT
CGCTATCAAG ATGTGTTCAG TGATCTTGCG GTTTCATGGC TGCAAGGTAA ACACAATGGT
TCGCTCAGAG ATAGCCAAGA TGACGATGAA TACTTAGCTA ACATAGCCCC ACTCGATATT
CGCCTGCGTT TAGGCATGTA TATTACCGAT GACATTTCTA TCGCTTGGCA GGGCGCTTGG
TATGACGCTC AAGATCATGT TCCCCACGGT GATATCTTTA ATGCCGAGTC ACCCAGCGAG
AATTATTTCC TACAGAATGT GTATTTTGCC TATGAACCTC AAGCTATTTT AAAGGGATTA
AGTGTGCGTT TGATGGTAAA AAATCTCACC AATCAGCAAG TGGTACCGTT TCTCTCCGAT
GGGATACCCG CAGCTGGGCG TGATGTTCGT TTGAGTTTAG CCTATGAATT TTAA
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| Protein sequence | MCYQPKLGKL KTKVSLFVVG ILPSLPLLAS DVLGEPKVQP IEVIQVHGQQ YRRVMTVTKP
GEAIISMDQI EEMQATTFAE VIDDMAGAHI DGGTRSGGER INVWGFGETE DFNVYVDNAP
VGFEQYRYGS FFLDPDLIKR VEVIKGAHDV RSGNGGFGGA MYVVTKSADD FLKYDQSLGA
RVKTSYASNN DAMGYTGTVY GRVNSSLSGL LHLTRRDAGD VTLANGEEYE YSGYEQNNYL
GKMDYAQGDH QLALSVTHYL DEGRKPWANR RGPMPAISDY NIKKYGSYEQ ALYATTAYNT
YEDNTWSANY RYSPSNPLID TQVVISHSAN ARHWVRPDIA WEKMTVSVGN FGHESWLDYK
RDYIDINNLS LIGDHEITTG LQYRSLDRTS LVFNKSYEKN PEKNFGWYTP YYQPEGRQDT
YAAYVRDAIH ITNDLTVTPS LRYDFIYSIG RPNIAPDYND IAAGHDYSST HHSGFSPRLG
IDYQLTNHAR LNFDYAYSLQ APVVDEIYAV QYAKASITGT SRNIDVERLH AFKLGLMTQH
QHVLANEDAL STQITLFANL GRDDIAQRRG AKSDKTHLIQ SGYTNLDGYH IYGADFEAQY
RYQDVFSDLA VSWLQGKHNG SLRDSQDDDE YLANIAPLDI RLRLGMYITD DISIAWQGAW
YDAQDHVPHG DIFNAESPSE NYFLQNVYFA YEPQAILKGL SVRLMVKNLT NQQVVPFLSD
GIPAAGRDVR LSLAYEF
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