| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1306 |
|---|
| Symbol | |
|---|
| ID | 5080933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 1472805 |
|---|
| End bp | 1473473 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640498438 |
|---|
| Product | glutathione S-transferase domain-containing protein |
|---|
| Protein accession | YP_001182833 |
|---|
| Protein GI | 146292409 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATT TATACACAGC CGCGACCCCT AACGGTTTTA AAATTTCCAT CGCACTGGAA
GAAATGGGAC TTGAATATCG TGTCCATAAA TTAGATTTCA GCACCAGTGA GCAAAAACAG
CCCGAGTTTA TCGCCATCAA TCCCAACGGT CGCATTCCCG CCATTATCGA CCGCGATAAC
GAGAATTTTG TGGTATTCGA ATCGGGTGCG ATTCTGCTGT ATCTCGCCGA AAAAACAGGT
AAATTCCTGC CAGCCGATCC TAAAAAGCGC TCACAGGTGA TCCAATGGTT AATGTTCCAA
ATGAGCGGCG TCGGTCCCAT GATGGGACAA GCCAACGTAT TCTTTAGGTA CTTCCCTGAA
AAAATCCCCG CAGCCATTGA CCGTTATCAA AAAGAAGGTC GACGTTTATT CGAGGTTATG
AATACTCAAC TAGCTATAAA TCAATACCTT GCAGGTGACG AATACACGAT TGCCGACATC
GCCACTTGGC CTTGGGTGCG GATCCACGAG TGGAGCGGCA TCAATATGGA AGGTCTGACA
CATTTGCAAC GTTGGTTAGA TGAGTTAGCA CTCAGACCCG CGTGCCAAAA AGGCATAGTC
ACGCCACCAC CGGTGGAAAT GAGTGATGAA GAACGGGCTA AGCAAATCCA AAAGATGGTG
ACGAAATAA
|
|---|
| Protein sequence | MIDLYTAATP NGFKISIALE EMGLEYRVHK LDFSTSEQKQ PEFIAINPNG RIPAIIDRDN
ENFVVFESGA ILLYLAEKTG KFLPADPKKR SQVIQWLMFQ MSGVGPMMGQ ANVFFRYFPE
KIPAAIDRYQ KEGRRLFEVM NTQLAINQYL AGDEYTIADI ATWPWVRIHE WSGINMEGLT
HLQRWLDELA LRPACQKGIV TPPPVEMSDE ERAKQIQKMV TK
|
|---|
| |