| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1299 |
|---|
| Symbol | |
|---|
| ID | 5081026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1464754 |
|---|
| End bp | 1466592 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640498431 |
|---|
| Product | peptidase M1, membrane alanine aminopeptidase |
|---|
| Protein accession | YP_001182826 |
|---|
| Protein GI | 146292402 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.19072 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATAG AATCAACACA CAGTCATTTA TTTATCAATA CCGATTGGGA TCTGACCCGA
GATTATCATT CTTTTGCCAA TAGCGAACAG GTGCAAGTGA CCCATGTCTC TTTGGAGCTA
TCGGTGGATT TTTATGCTCA GCGCCTTACG GGTAAAGCGA CACTGTCATT GAACTTTGTG
CAATCACATG TTGCAGAGCT TTGGCTTGAT ACTCGAGATT TAACCATACT TGCCGTGACA
ACCGTTAATG CAGAGCCCCT TAATGTAGAG TTCCTTGATT TTGAATTCCA AGAAAACAAT
CCAATCCTAG GGCAAAAACT CTGTATTCGT TTACCTCGCA CTCCTTGCTA TCAGATTTGT
ATTGAATACC AAACATCCCC CAATGCACAA GGGTTGCAAT GGCTAACGCC AGAACAAACC
GCGGGTAAAC AACAACCTTA CCTCTTTAGT CAATCGCAAC CCATTAATGC TCGTAGCTGG
ATCCCACTGC AAGATAGCCC CAAAGTGCGA ATTACCTTCG ACGCTAAGGT ACATGTACCA
CAGGGGATGC GTGCTGTAAT GAGTGCTATG AATCATCCAG AAACCCCATT AGAAGGCGCC
TTTACATTTG AGATGGAAAA GCCCATTCCT ACTCACCTAA TGGCATTAGC TGTAGGAGAT
ATAGCTTTCC AAGCAATAGG TCCAAGATGT GGCGTTTATA CTGAACCCAG TATGCTTAAG
GCTGCCGTTG CCGAATTTGA TGATACCGAA CATATGCTCG AGGTTGCTGA AGCATTACTT
GGTCCCTATG TGTGGGATCG CTATGACATC ATAGTGCTGC CACCGAGTTT TCCCTTTGGT
GGAATGGAAA ATCCAAGATT GGCGTTCTTA ACGCCAACCT TGATTGCTGG GGATAAAAGT
TTGGTGTCAA CCGTTGCCCA TGAGTTAGCC CATTCTTGGA CTGGGAATTT AGTGAGCAAT
GCAACTTGGC GGGATCTTTG GTTAAACGAA GGTTTTACCA CCTATTTTAC CAATCGAATT
GTCGAAGCCG TTTATGGTAA AGAACAGGCT GAATTAGAGT GGGTGATAGA GTTTGGCCGT
CTAAAAGAGG AAATGACCTC GTTACCTAAA TACAAACAAA CCTTACCTGC GAATGTGCAA
CTGGACGATC CCAATCTTGC GTTTAATCGC TTTACCTATG ATAAAGCTTC CATGTTTGTT
CACGAGCTAG AACATAGACT CGGAAGGATT GAGTTCGATA AATTTTTAAT CAAATATGTG
AGCCATTTTG CTTTTAAAGC CATCACGACC GAGGAGTTTG TCACTTATGC TCAAGCAACC
ATATTACAAA CATATCCAGA TAAAATAAGT GAAGTAGAGC TGCTTGAGTG GGTTTATGGT
GAAGGCTTAC CAGAATGGTA TAGAGGTCCA ACTTCGTCGA GTTTAGATAA AGTGGATGAT
GCACTGGCGT GTTTTTTACA GGGGACAGCG GCAAGTCATT TAACCGTTAA AGGTTGGCGA
GTTCACCACT GGCAATATTT TTTGAGTCAA TTACCTGAAG TTTTGACCCA AGTCCAACTG
ATGGATCTTG ATGACACTTT TCATTTCACC CAATCTAAGA ATGCAGAAAT TGCCTGTGAT
TGGTTTAGAG TGGCAATTCG TAATCACTAT GATCCAGTTT TGCCAGCTTT AAGTGCTTAT
TTGATACGCA TTGGCCGAGG TAAATTTGTG CGACCGCTTT ATGCAGAACT ACAAATTGCT
GGATATGATA CCGAATTAAA AGAAATTTAT GCTAAAGCTC GTAAAGGGTA TCATCCATCG
ATTCAAGTAC AGTTGGATAA GTCGTTAAAA TGCCCATAA
|
|---|
| Protein sequence | MSIESTHSHL FINTDWDLTR DYHSFANSEQ VQVTHVSLEL SVDFYAQRLT GKATLSLNFV
QSHVAELWLD TRDLTILAVT TVNAEPLNVE FLDFEFQENN PILGQKLCIR LPRTPCYQIC
IEYQTSPNAQ GLQWLTPEQT AGKQQPYLFS QSQPINARSW IPLQDSPKVR ITFDAKVHVP
QGMRAVMSAM NHPETPLEGA FTFEMEKPIP THLMALAVGD IAFQAIGPRC GVYTEPSMLK
AAVAEFDDTE HMLEVAEALL GPYVWDRYDI IVLPPSFPFG GMENPRLAFL TPTLIAGDKS
LVSTVAHELA HSWTGNLVSN ATWRDLWLNE GFTTYFTNRI VEAVYGKEQA ELEWVIEFGR
LKEEMTSLPK YKQTLPANVQ LDDPNLAFNR FTYDKASMFV HELEHRLGRI EFDKFLIKYV
SHFAFKAITT EEFVTYAQAT ILQTYPDKIS EVELLEWVYG EGLPEWYRGP TSSSLDKVDD
ALACFLQGTA ASHLTVKGWR VHHWQYFLSQ LPEVLTQVQL MDLDDTFHFT QSKNAEIACD
WFRVAIRNHY DPVLPALSAY LIRIGRGKFV RPLYAELQIA GYDTELKEIY AKARKGYHPS
IQVQLDKSLK CP
|
|---|
| |