| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1298 |
|---|
| Symbol | |
|---|
| ID | 5081025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1463316 |
|---|
| End bp | 1464287 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640498430 |
|---|
| Product | phosphate binding protein |
|---|
| Protein accession | YP_001182825 |
|---|
| Protein GI | 146292401 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR02136] phosphate binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000202068 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA AAAAGCTTGT CGGCGCGATG ACTCTTACTG CCGCTGGTGT ATTCTCTGCC
ACTGCCATGG CATCGATTGA TCAATCTCTG CCTACTTATG AGAAAACAAG TGGCGTATCA
GGCAATCTAT CATCTGTAGG TTCGGATACT TTAGCCAATA TGATGACATT ATGGGCTGAA
GAATTTAAGC ACATGTACCC TAACGTCAAC ATCCAGATCC AAGCCGCAGG TTCTTCTACA
GCGCCACCAG CGTTGACAGA AGGGACTTCA CAGTTCGGTC CTATGAGCCG CAAGATGAAG
CCCAACGAAA TTGAAGCGTT TGAAAAGCAT TATGGTTATA AGCCTACAGA AATTCGCGTA
GCAATTGATG CTTTAGCTGT GTTTGTACAT AAAGACAACC CAATTAAAGG TCTAACTGCA
GAGCAAGTTG ATGGTATTTT CTCCTCTACG CACAAATGTG GTGGCAGTGA TATCCAACGT
TGGGGTGATT TAGGCCTTGA CGGTAACTGG TCAGCAAAAG ATGTTCAACT CTACGGCCGT
AACTCTGTAT CTGGTACTTA TGGTTATTTT AAAGAACATG CTCTTTGTAA AGGTGATTTC
AAAGCCAACG TGAATGAGCA ACCCGGTTCT GCTTCGGTAG TGCAATCAGT ATCTCAATCA
CTTAATGCTG TGGGTTATTC TGGAATTGGC TATGTTACAG CAGGTGTAAA AGCTGTGCCT
ATTGCCAAGA AAGGCAATGA GTTTATCGAA GCGACACCTG AAAATGCGGC TAACGGTACT
TACCCATTAT CACGTTACCT ATATGTTTAC GTGAACAAAC AACCAAACAA AGATTTAGCG
CCAATGGAAA AAGAATTCAT CCGTTACGTG CTGTCTAAGC AAGGTCAGCA AGTGGTAGAG
AAAGACGGTT ATGTCACTTT ACCCAAAAGC GTTGTTGCTA AAGATTTAGA GCAATTAGGT
ATTCGCTTGT AA
|
|---|
| Protein sequence | MKLKKLVGAM TLTAAGVFSA TAMASIDQSL PTYEKTSGVS GNLSSVGSDT LANMMTLWAE
EFKHMYPNVN IQIQAAGSST APPALTEGTS QFGPMSRKMK PNEIEAFEKH YGYKPTEIRV
AIDALAVFVH KDNPIKGLTA EQVDGIFSST HKCGGSDIQR WGDLGLDGNW SAKDVQLYGR
NSVSGTYGYF KEHALCKGDF KANVNEQPGS ASVVQSVSQS LNAVGYSGIG YVTAGVKAVP
IAKKGNEFIE ATPENAANGT YPLSRYLYVY VNKQPNKDLA PMEKEFIRYV LSKQGQQVVE
KDGYVTLPKS VVAKDLEQLG IRL
|
|---|
| |